CV712334

Overview
NameCV712334
Unique NameCV712334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.507e-75
Identity = 144/168 (85.71%), Postives = 146/168 (86.90%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSFPYKE  NGILWEVEGKWVVQGAVDVDIGANPS              VKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.843e-73
Identity = 136/168 (80.95%), Postives = 146/168 (86.90%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSFPYKE  NG+LWEVEGKWV+QGAV+VDIGANPS              VKVVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.011e-71
Identity = 132/168 (78.57%), Postives = 142/168 (84.52%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSFPYKE ENG++WEVEGKWVVQGAVDVDIGANPS              VKVVDIVDTFRLQEQP  DKKQF+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.248e-70
Identity = 133/168 (79.17%), Postives = 142/168 (84.52%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSF YKE ENG+LWEVEGKWVV+GAVDVDIGANPS              VKVVDIVDTFRLQEQPAFDKKQFVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D QFFVGESM DD CLVFAYYK+GA DPTFLY A ALKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.248e-70
Identity = 131/168 (77.98%), Postives = 140/168 (83.33%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSFPYKE ENG+LWEV+GKWVVQGAVDV+IGANPS              V+VVDIVDTFRLQEQPAFDKKQFVT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG LVFAYYKEG+ DP FLYIA  LKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.236e-69
Identity = 131/168 (77.98%), Postives = 141/168 (83.93%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSFPY+E ENGILWEV+GKWVVQGA+DVDIGANPS              VKVVDIVDTFRLQEQP FDKKQFVT+MKR+IK L+ KL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GATDPTFLY +  LKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 6.134e-69
Identity = 129/168 (76.79%), Postives = 139/168 (82.74%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSFPYKE +NG+LWEV+GKWVVQGAVDV+IGANPS              VKVVDIVDTFRLQEQPAFDKKQFVTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD  LVFAYYK+G+ DPTFLY+A  LKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.973e-67
Identity = 131/170 (77.06%), Postives = 140/170 (82.35%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXV--KVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLL+GDELLSDSFPYKE +NG+LWEV+GKWVVQGAVDVDIGANPS                 KVVDIVDTFRLQEQP FDKKQFVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  LKEVKC
Sbjct:    1 MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADADADEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_ARATH (Translationally-controlled tumor protein homolog OS=Arabidopsis thaliana GN=TCTP PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.973e-67
Identity = 126/168 (75.00%), Postives = 136/168 (80.95%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            MLVYQDLLTGDELLSDSFPYKE ENGILWEVEGKWV  GAVDV+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKLSEE Q +FKK IEGATKFLL +LSD QFFVGE MHDD  LVFAYYKEG+T+PTFLY A  LKEVKC
Sbjct:    1 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGVDDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKFLLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168          
BLAST of CV712334 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.577e-67
Identity = 128/168 (76.19%), Postives = 139/168 (82.74%), Query Frame = -3
Query:  211 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVKC 714
            M+VYQDLL+GDELLSDSFPYKE  NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKKQF+ ++KR+IK L  KLSEERQ  FKKN+EGA K L+SKLSDLQFFVGESMHDDG +VFAYYK+GATDPTFLY AD LKEVKC
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEEGVKIRLV-KVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167          
The following BLAST results are available for this feature:
BLAST of CV712334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_HEVBR1.507e-7585.71Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV1.843e-7380.95Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA1.011e-7178.57Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN4.248e-7079.17Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC4.248e-7077.98Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ1.236e-6977.98Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU6.134e-6976.79Translationally-controlled tumor protein homolog O... [more]
TCTP_FRAAN1.973e-6777.06Translationally-controlled tumor protein homolog O... [more]
TCTP_ARATH1.973e-6775.00Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ2.577e-6776.19Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001D23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712334 ID=CV712334; Name=CV712334; organism=Citrus sinensis; type=EST; length=770bp
AAACTATTTAAGTTATNTTGGTAATTCAATCTCAAACCATAAAACCCAAT
AATTAGGAGCAGAAAAACATATTGTTTATGTCAAAATAAAAACTAAAAAA
CAGCAAGCACAAGTCCCGAGTAAACCAGTACAAAAGATACATAAAAATAA
CCGCGGGCAATAATTAAAACTAGAACTACAGCAGGCACTTCCTCTTCGAA
GCCCGGCTTAGCACTTCACCTCCTTCAATGCATCAGCAATATACAAAAAT
GTTGGGTCGGTCGCACCTTCCTTGTAGTAAGCAAAGACAAGACAGCCATC
ATCATGCATGCTCTCCCCAACAAAGAATTGAAGGTCACTGAGCTTCGAGA
GCAAGAACTTGGTCGCTCCCTCAATATTCTTCTTAAATATCTCCTGCCTC
TCCTCACTCAGCTTGGGCGTCAGCAACTTGATGAATCTCTTCATGTATGT
TACAAACTGCTTCTTGTCAAAAGCAGGTTGCTCCTGCAGCCTGAATGTGT
CGACAATGTCGACCACCTTCACGGCTTGGTCATCAACACCCTCATCCTCA
TCAGCTCCTTCGGCAGAAGGATTTGCACCAATGTCAACATCAACGGCTCC
TTGTACAACCCACTTTCCCTCAACTTCCCACAGAATCCCATTCTCAGTTT
CCTTGTAGGGAAAAGAGTCGGAGAGAAGCTCATCACCGGTGAGGAGATCT
TGATAGACCAACATGATTGCAGTCTCTCTCGCGAACACAAAAAAGAAAAA
TAATCAACGGAGAAAACTGG
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