CV712197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712197 vs. ExPASy Swiss-Prot
Match: EBP2_ARATH (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana GN=At3g22660 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.234e-54 Identity = 124/240 (51.67%), Postives = 147/240 (61.25%), Query Frame = -2 Query: 136 DISCPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFER-SNKKRPGVSPXXXXXXXXXXXXXXXXXXXXXXXXXDFRNXXXXXXXXXXXXKQNTSDTTDDLR-GFSKGDGAGNKRRKR 849 DIS PE+ W HKLT++IDQ VDVNDDL RE +FYTQALEGTR+AF KL MG+ FLRPA+YYAEMVKSD HMEKVK RLL E+ +Q QK KERAK+KK+ IESVKKWRKQRQQSGF+ + + ELD FE GKSF+R KKRPGVSP +FR+ KQNT++TT+D + GF G +GNKR+KR Sbjct: 62 DISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKKDNIESVKKWRKQRQQSGFSDKAGEPELD--FESGKSFQRGGGKKRPGVSP------GDRSGGKGRPTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293
BLAST of CV712197 vs. ExPASy Swiss-Prot
Match: EBP2_SCHPO (Probable rRNA-processing protein ebp2 OS=Schizosaccharomyces pombe GN=ebp2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15 Identity = 57/175 (32.57%), Postives = 81/175 (46.29%), Query Frame = -2 Query: 340 DISCPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGG-----KSFERSNKKRPGVSP 849 DIS EN K I I+ +V DDL RE +FY Q + + AF KL+ + RP DY+AEM+KSD HMEKV++ L+ E +Q+ K +ER ++KKE +E + +++ E D D+A K RS K RP +P Sbjct: 112 DISFVENQAVTTKEPIIIE-----NVEDDLARELAFYKQGVSSVKAAFAKLREANVLISRPHDYFAEMLKSDDHMEKVRQELIKEATAKKLSQQAKKQRELKKFGKQVQLAKQEERQREKKETLEKINLLKRKHTGGDLTTEDD---FDIALSSASADTFKKGSRSTKSRPQPNP 278
BLAST of CV712197 vs. ExPASy Swiss-Prot
Match: EBP2_YEAST (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae GN=EBP2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15 Identity = 48/146 (32.88%), Postives = 78/146 (53.42%), Query Frame = -2 Query: 355 DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFE---GGKSFERS--NKKR 777 D+ DD +RE +FY Q+L+ A ++L+ + +PF RP DY+AEMVKSD HM+K+K +L+ E +Q ++R +K+E +E +K + +R+ + E+D E ++ E GK F+R N KR Sbjct: 235 DIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQVQNATLQKRQLEKRETLEKIKSLKNKRKHN----EIDHSEFNVGVEEEVEGKRFDRGRPNGKR 376
BLAST of CV712197 vs. ExPASy Swiss-Prot
Match: EBP2_CAEEL (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans GN=C18A3.3 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.588e-14 Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = -2 Query: 442 WIHKLTIDIDQEQEVDV---NDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXIQVQKTKERAKQKKEEIESVKKWRKQRQQ 822 W+ L + + E+D NDD +RE +FY QA + + A+ +L ++G+ LRP DYYAEM KSD HM+KV++RLL Q +Q + + +KK E+VKK +K +Q Sbjct: 105 WVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREEKKFAVKVQKEVLAAKNTEKKNLAEAVKKHKKGMKQ 233
BLAST of CV712197 vs. ExPASy Swiss-Prot
Match: EBP2_MOUSE (Probable rRNA-processing protein EBP2 OS=Mus musculus GN=Ebna1bp2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-11 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = -2 Query: 361 DQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNK 795 DQ++ V+ DD +RE SFY QA +L + +P RP DY+AEM KSD M+K++++L ++Q +Q + ++R ++K + ++KK++K GF+ ++D E D K ERS K Sbjct: 91 DQKKGVNPEDDFQREMSFYRQAQAAVLAVLPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQKLQTKQAAMEKSEKAKQLRALRKYGKKVQTEVLQKRQREKAHMMNAIKKYQK-----GFSDKLDFLEGD-----QKPVERSAK 225
BLAST of CV712197 vs. ExPASy Swiss-Prot
Match: EBP2_HUMAN (Probable rRNA-processing protein EBP2 OS=Homo sapiens GN=EBNA1BP2 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11 Identity = 41/151 (27.15%), Postives = 75/151 (49.67%), Query Frame = -2 Query: 343 EQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVD--KGELDLAFEGGKSFERSNKKRPGVS 789 ++ VD DD +RE SFY QA +L + +P RP DY+AEM KSD M+K++++L ++Q +Q + ++R ++K + ++KK++K GF+ ++D +G+ + K+ + + R G S Sbjct: 93 QKAVDPEDDFQREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQK-----GFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPS 238 The following BLAST results are available for this feature:
BLAST of CV712197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712197 ID=CV712197; Name=CV712197; organism=Citrus sinensis; type=EST; length=850bpback to top |