CV712196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712196 vs. ExPASy Swiss-Prot
Match: EBP2_ARATH (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana GN=At3g22660 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.849e-61 Identity = 123/192 (64.06%), Postives = 140/192 (72.92%), Query Frame = 2 Query: 182 KLAEPSKQAVYNRDGLEEKLQDISWPENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFER-SNKKRPGVSP 754 KLAEP+K A+YNRDGL +KLQDISWPE+ W HKLT++IDQ VDVNDDL RE +FYTQALEGTR+AF KL MG+ FLRPA+YYAEMVKSD HMEKVK RLL E+ Q QK KERAK+KK+ IESVKKWRKQRQQSGF+ + + ELD FE GKSF+R KKRPGVSP Sbjct: 41 KLAEPTKTAIYNRDGLLDKLQDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKKDNIESVKKWRKQRQQSGFSDKAGEPELD--FESGKSFQRGGGKKRPGVSP 230
BLAST of CV712196 vs. ExPASy Swiss-Prot
Match: EBP2_SCHPO (Probable rRNA-processing protein ebp2 OS=Schizosaccharomyces pombe GN=ebp2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.651e-17 Identity = 57/196 (29.08%), Postives = 89/196 (45.41%), Query Frame = 2 Query: 185 LAEPSKQAVYNRDGLEEKLQDISWPENAGWIHKLTIDIDQEQEVD-VNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGG-----KSFERSNKKRPGVSP 754 L K A+ N LE + I +P++ ++ + + ++ V DDL RE +FY Q + + AF KL+ + RP DY+AEM+KSD HMEKV++ L+ E Q+ K +ER ++KKE +E + +++ E D D+A K RS K RP +P Sbjct: 86 LIRKRKLAINNTVALENIYERIKYPDDISFVENQAVTTKEPIIIENVEDDLARELAFYKQGVSSVKAAFAKLREANVLISRPHDYFAEMLKSDDHMEKVRQELIKEATAKKLSQQAKKQRELKKFGKQVQLAKQEERQREKKETLEKINLLKRKHTGGDLTTEDD---FDIALSSASADTFKKGSRSTKSRPQPNP 278
BLAST of CV712196 vs. ExPASy Swiss-Prot
Match: EBP2_YEAST (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae GN=EBP2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16 Identity = 55/189 (29.10%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 200 KQAVYNRDGLEEKLQDIS--WPENAGWIHK-LTIDIDQEQEV-DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFE---GGKSFERS--NKKR 739 K V N ++ L+ + W +++ H+ +T + + ++ + D+ DD +RE +FY Q+L+ A ++L+ + +PF RP DY+AEMVKSD HM+K+K +L+ E Q ++R +K+E +E +K + +R+ + E+D E ++ E GK F+R N KR Sbjct: 192 KLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQVQNATLQKRQLEKRETLEKIKSLKNKRKHN----EIDHSEFNVGVEEEVEGKRFDRGRPNGKR 376
BLAST of CV712196 vs. ExPASy Swiss-Prot
Match: EBP2_CAEEL (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans GN=C18A3.3 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.418e-15 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 200 KQAVYNRDG-LEEKLQDISWPENAGWIHKLTIDIDQEQEVDV---NDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQ 652 K+ + N+ ++EKL +I+ ++ W+ L + + E+D NDD +RE +FY QA + + A+ +L ++G+ LRP DYYAEM KSD HM+KV++RLL Q Q + + +KK E+VKK +K +Q Sbjct: 82 KRPIINKSAEMKEKLAEIT--KDLPWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREEKKFAVKVQKEVLAAKNTEKKNLAEAVKKHKKGMKQ 233
BLAST of CV712196 vs. ExPASy Swiss-Prot
Match: EBP2_MOUSE (Probable rRNA-processing protein EBP2 OS=Mus musculus GN=Ebna1bp2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12 Identity = 53/197 (26.90%), Postives = 91/197 (46.19%), Query Frame = 2 Query: 191 EPSKQAVYNRDGLEEKLQDISWPENAGWIHKLTIDI----------------DQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNK 733 E K+AV + GL++ L + + W+ +L + + DQ++ V+ DD +RE SFY QA +L + +P RP DY+AEM KSD M+K++++L ++Q Q + ++R ++K + ++KK++K GF+ ++D E D K ERS K Sbjct: 41 EKPKKAVNDVSGLKQCLAEFR--RDLEWVERLDVTLGPVPEVSETQPTPQNQDQKKGVNPEDDFQREMSFYRQAQAAVLAVLPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQKLQTKQAAMEKSEKAKQLRALRKYGKKVQTEVLQKRQREKAHMMNAIKKYQK-----GFSDKLDFLEGD-----QKPVERSAK 225
BLAST of CV712196 vs. ExPASy Swiss-Prot
Match: EBP2_HUMAN (Probable rRNA-processing protein EBP2 OS=Homo sapiens GN=EBNA1BP2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12 Identity = 50/205 (24.39%), Postives = 94/205 (45.85%), Query Frame = 2 Query: 191 EPSKQAVYNRDGLEEKLQDISWPENAGWIHKLTIDID----------------QEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVD--KGELDLAFEGGKSFERSNKKRPGVS 751 E K+AV + +GL++ L + + W+ +L + + ++ VD DD +RE SFY QA +L + +P RP DY+AEM KSD M+K++++L ++Q Q + ++R ++K + ++KK++K GF+ ++D +G+ + K+ + + R G S Sbjct: 41 EGPKKAVNDVNGLKQCLAEFK--RDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQAAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKYQK-----GFSDKLDFLEGDQKPLAQRKKAGAKGQQMRKGPS 238
BLAST of CV712196 vs. ExPASy Swiss-Prot
Match: EBP2_XENLA (Probable rRNA-processing protein EBP2 OS=Xenopus laevis GN=ebna1bp2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11 Identity = 40/164 (24.39%), Postives = 74/164 (45.12%), Query Frame = 2 Query: 191 EPSKQAVYNRDGLEEKLQDISWPENAGWIHKLTIDID--------------QEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRK 640 E K+ + GL++ L+D+ W+ +L + +D +++ DD +RE FY QA + +L+ + + RP DY+AEM K+D HM+K++ +L +Q QV+ ++R K+K + +KK++K Sbjct: 44 EGKKKPFNDASGLKQSLKDLK--NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAEDDFQREMCFYRQAQAAVLYSLPRLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQASMEKSEKAKQLRALRKYGKKVQVEVLQKRQKEKSAMVTQIKKYQK 205 The following BLAST results are available for this feature:
BLAST of CV712196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712196 ID=CV712196; Name=CV712196; organism=Citrus sinensis; type=EST; length=837bpback to top |