CV712171
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 9.287e-56 Identity = 133/267 (49.81%), Postives = 159/267 (59.55%), Query Frame = -2 Query: 107 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMLTENGIFLNCNGYD-ADFGNSIQQQPLKLKRSVSAGSSVPVTTGLYMXXXXXXXXXXXXXXXXXXXSNYNIYKPVARSGGINVDVNVVPEP-ETTSSSNDPPTSLSLSLPGVD-----XXXXXXXXXXXSTQAVNAKASVPAPVSSDSGSKGLV--------GFSKEFMAVMQEMIKQEVRTYMAALEQ 862 SKSIPGRSGKSCRLRWCNQLSPQVEHR F+ EEDE I RAHA+FGNKWATIARLLNGRTDNA+KNHWNSTLKRK C GYD + S +P +KRSVSAGS PV TGLYM + ++KPV R G + V+P P ET+SSS+DPPTSLSLSLPG D +T + + + + + G +G + G EFMAV+QEMIK EVR+YM +++ Sbjct: 33 SKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK-------------CGGYDHRGYDGSEDHRP--VKRSVSAGSP-PVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAV-----VLPLPIETSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRGAIEEMGKSFPGNGGEFMAVVQEMIKAEVRSYMTEMQR 278
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.036e-22 Identity = 57/120 (47.50%), Postives = 76/120 (63.33%), Query Frame = -2 Query: 503 IPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKC---SSMLTENGIFLNCNGYDADFGNSIQQQPLKLKRSVSAGSSVPVTT 853 IPGR GK CR RW N LSP+V +TPEED++II AHA GNKW I+++L+GR NAIKNHWNSTL +K S L + + + DA+ G+S P+ L +S S+ ++ TT Sbjct: 307 IPGRIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKIGGDSKSLNKEKDDDDDDDEDAEDGSSPVLSPISLYQSSSSTTTTTTTT 426
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYB_MOUSE (Myb proto-oncogene protein OS=Mus musculus GN=Myb PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = -2 Query: 641 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 862 +K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 119 AKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYB_HUMAN (Myb proto-oncogene protein OS=Homo sapiens GN=MYB PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = -2 Query: 641 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 862 +K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 119 AKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYB_CHICK (Myb proto-oncogene protein OS=Gallus gallus GN=MYB PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = -2 Query: 641 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 862 +K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 119 AKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYB_BOVIN (Myb proto-oncogene protein OS=Bos taurus GN=MYB PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = -2 Query: 641 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 862 +K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 119 AKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21 Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = -2 Query: 641 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 862 +K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNA+KNHWNST++RK Sbjct: 48 AKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRK 121
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21 Identity = 53/124 (42.74%), Postives = 73/124 (58.87%), Query Frame = -2 Query: 512 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMLTENGIFLNCNG-------YDADFGNSIQQQPLKLKRSVSAGSSVP 862 +K + GR GK CR RW N L+P+V+ ++T EED +I +AH GN+WA IA+LL GRTDNA+KNHWNST+KRK E G FL D+ + + Q + L V +++P Sbjct: 110 AKQLRGRMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK-----VETGGFLTVKASGQQEEREDSGYQAAEDQNHVLLSEPVERSANIP 228
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = -2 Query: 602 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMLTENGIFLN 862 +K + GR GK CR RW N L+P+V+ ++T EED +I AH GN+WA IA+LL GRTDNA+KNHWNST+KRK + G FLN Sbjct: 110 AKHLKGRLGKQCRERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK-----VDTGGFLN 191
BLAST of CV712171 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = -2 Query: 641 SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 862 +K + GR GK CR RW N L+P+V+ ++T EED I AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 116 AKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 189 The following BLAST results are available for this feature:
BLAST of CV712171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712171 ID=CV712171; Name=CV712171; organism=Citrus sinensis; type=EST; length=863bpback to top |