CV712165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.825e-21 Identity = 60/179 (33.52%), Postives = 95/179 (53.07%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK VLA RSPVF A +++ +++ D++ V K ++ FIY P+++ MA +LLAAAD+YALERLK++CE LC ++++ VA TL LA+ H QLKA + FI L+ +M+T G++ + +S P ++ E + +A Sbjct: 209 QEFKAHKSVLAARSPVFNAMFEHEMEESKKNRVEINDLDPEVFKEMMRFIYTGRAPNLDK------------MADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETSGWKSMIQSHPHLVAEAFRALA 375
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOPL_MOUSE (Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.935e-21 Identity = 59/179 (32.96%), Postives = 95/179 (53.07%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK VLA RSPVF A +++ +++ D++ V K ++ F+Y P+++ MA +LLAAAD+YALERLK++CE LC ++++ VA TL LA+ H QLKA + FI L+ +M+T G++ + +S P ++ E + +A Sbjct: 209 KEFKAHKSVLAARSPVFNAMFEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGKAPNLDK------------MADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNNQATDIMETSGWKSMIQSHPHLVAEAFRALA 375
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOLA_DANRE (Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 61/179 (34.08%), Postives = 92/179 (51.40%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A +++ + + D+E V K ++ FIY P++E MA LLAAAD+YALERLK++CE LC +++ VA TL LA+ H QLKA + FI L+ +M+T G++ + +S P ++ E + +A Sbjct: 209 QEFKAHKSILAARSPVFNAMFEHEMEESKKNRVDISDVEPEVFKEMMGFIYTGKAPNLEK------------MADSLLAAADKYALERLKVMCEEALCNSLSVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMIQSHPHLVAEAFRALA 375
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOP_DANRE (Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A +++ +++ D+E V K ++ FIY P+++ MA LLAAAD+YALERLK++CE LC +++ A L LA+ H QLK + FI + VM+T G++ + S P ++ E + +A Sbjct: 209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEAEVFKEMMFFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCTSLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVASHPHLVAEAYRSLA 357
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOPL_XENLA (Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20 Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFI----------------ASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A P+++ + + D++ V K ++ FIY P ++ MA LLAAAD+YALERLK++CE LC ++ + VA L LA+ H QLKA + FI + +M+T G++ + +S P ++ E + +A Sbjct: 209 KEFKAHKSILAARSPVFSAMFEHPMQESRKNRVYIRDVDPEVFKEMMRFIYTGGTPHVDK------------MADKLLAAADKYALERLKVMCEESLCNNLTVENVADVLILADLHSAEQLKAQAIDFINRCSVLGQLGCKDRKNCNSNQTMDIMETAGWKSMIKSHPHLVAEAFRALA 375
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOLB_DANRE (Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20 Identity = 60/179 (33.52%), Postives = 92/179 (51.40%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A +++ + + D+E V + ++ FIY P++E MA +LLAAAD+YALERLK+LCE LC +++ VA L LA+ H QLKA + FI L+ +M+T G++ + +S P ++ E + +A Sbjct: 209 QEFKAHKSILAARSPVFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTGKAPNLEK------------MADNLLAAADKYALERLKVLCEEALCNSLSVENVADVLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHAADIMETAGWKAMIQSHPHLVAEAFRALA 375
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOP_PONAB (Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.668e-20 Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A +++ +++ D+E V K ++ FIY P+++ MA LLAAAD+YALERLK++CE LC ++++ A L LA+ H QLK + FI + V++T G++ + S P ++ E + +A Sbjct: 209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOP_MOUSE (Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.668e-20 Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A +++ +++ D+E V K ++ FIY P+++ MA LLAAAD+YALERLK++CE LC ++++ A L LA+ H QLK + FI + V++T G++ + S P ++ E + +A Sbjct: 209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOP_HUMAN (Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.668e-20 Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A +++ +++ D+E V K ++ FIY P+++ MA LLAAAD+YALERLK++CE LC ++++ A L LA+ H QLK + FI + V++T G++ + S P ++ E + +A Sbjct: 209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357
BLAST of CV712165 vs. ExPASy Swiss-Prot
Match: SPOP_BOVIN (Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.668e-20 Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = -3 Query: 336 ERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVXKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 824 + F AHK +LA RSPVF A +++ +++ D+E V K ++ FIY P+++ MA LLAAAD+YALERLK++CE LC ++++ A L LA+ H QLK + FI + V++T G++ + S P ++ E + +A Sbjct: 209 QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357 The following BLAST results are available for this feature:
BLAST of CV712165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712165 ID=CV712165; Name=CV712165; organism=Citrus sinensis; type=EST; length=826bpback to top |