CX301751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301751 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.191e-24 Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 3 GRRLIWQGIPRSIRDSHRKVRDSQDGLIIQRNMALYFSGGDRTELKLRITGRIWKEE 173 GR+L WQGIPRSIRDSHRKVRDSQDGLII RN+ALYFSGGDR ELKLR+TGRIWKEE Sbjct: 252 GRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308
BLAST of CX301751 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.602e-23 Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 3 Query: 3 GRRLIWQGIPRSIRDSHRKVRDSQDGLIIQRNMALYFSGGDRTELKLRITGRIWKEE*RDIEG 191 GR+LIW+G PRS+RDSHRKVRDS DGLIIQRNMAL+FSGGDR ELKLR+TGRIWKE+ + EG Sbjct: 255 GRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQQSGEG 317
BLAST of CX301751 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.021e-22 Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 3 GRRLIWQGIPRSIRDSHRKVRDSQDGLIIQRNMALYFSGGDRTELKLRITGRIWKEE 173 GR+L W+G PRSIRDSHRKVRDS DGLIIQRNMAL+FSGGDR ELKLR+TG+IWKE+ Sbjct: 256 GRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIWKEQ 312
BLAST of CX301751 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.946e-22 Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 3 Query: 6 RRLIWQGIPRSIRDSHRKVRDSQDGLIIQRNMALYFSGGDRTELKLRITGRIWKEE 173 R+L WQGIPRSIRDSHRKVRDSQDGLII RN+ALYFSG D+ ELKLR+TGRIWKEE Sbjct: 250 RKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305
BLAST of CX301751 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.958e-21 Identity = 45/57 (78.95%), Postives = 52/57 (91.23%), Query Frame = 3 Query: 3 GRRLIWQGIPRSIRDSHRKVRDSQDGLIIQRNMALYFSGGDRTELKLRITGRIWKEE 173 GR+ W+G PRS+RDSHRKVRDS DGLIIQRNMAL+FSGGD+ ELKLR+TGRIWKE+ Sbjct: 238 GRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294 The following BLAST results are available for this feature:
BLAST of CX301751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301751 ID=CX301751; Name=CX301751; organism=Citrus sinensis; type=EST; length=557bpback to top |