DY257384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 4.598e-61 Identity = 115/137 (83.94%), Postives = 124/137 (90.51%), Query Frame = 2 Query: 83 LRGRKEMWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 493 L GR+E+WE LAEHIKFDHGY AKSPAI+NLLEIMGE T DQQRAFCQFVTGAPRLPPGGLA LNPKLTIVRKHSST+ + A+NG G SE+ DDDLPSVMTCANYLKLPPYSTKEIMYKKL+YAI+EGQGSFDLS Sbjct: 1753 LCGRRELWEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTS-SAAANGAGASETADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS 1888
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 6.461e-39 Identity = 83/137 (60.58%), Postives = 101/137 (73.72%), Query Frame = 2 Query: 83 LRGRKEMWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 493 L G +++ + +HIKFDHGYT+ SP + LL+I+ EF +QQRAF QFVTG+PRLP GGLA L+PKLTIVRKH S+S+D DLPSVMTCANYLKLPPYS+KE M +KL+YAI+EGQGSF LS Sbjct: 1379 LCGECDLFSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGSPRLPHGGLASLSPKLTIVRKHG-------------SDSSDTDLPSVMTCANYLKLPPYSSKEKMKEKLIYAITEGQGSFHLS 1502
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 8.753e-28 Identity = 69/134 (51.49%), Postives = 83/134 (61.94%), Query Frame = 2 Query: 92 RKEMWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 493 + + W+ L E + DHGYT S A+ L EI+ F +QQR F QFVTG+PRLP GG LNP LTIVRK + +E+ DD LPSVMTC NYLKLP YS+ EIM +KL+ A EGQ SF LS Sbjct: 1870 KADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFES-----------TENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS 1992
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 4.803e-26 Identity = 65/132 (49.24%), Postives = 80/132 (60.61%), Query Frame = 2 Query: 98 EMWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 493 E W A L + I DHGYT +SP I LL +M + +QR F QF+TG+ +LP GG A LNP LT+VR+ + P DD LPSVMTC NYLKLP YS+ E++ +L AI EGQGSF LS Sbjct: 1527 EDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRRLNE-----------PPYVPDDYLPSVMTCVNYLKLPEYSSSEVLGSRLSKAILEGQGSFHLS 1647
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.018e-24 Identity = 61/133 (45.86%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 95 KEMWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 493 +E W A L ++ +HGYT S I + + I+ F ++R F QF+TG+P+LP GG LNPK T+V KH A +G + D+ LPSVMTCANYLKLP Y++K+IM +L AI EG G+F LS Sbjct: 1362 EEDWSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKH-------AEDGL----TADEYLPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAFLLS 1483
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.389e-17 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 104 WEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISE 469 W + + + GYT SP + + ++ + D+++AF QF TG LPPGGLA L+P+LT+VRK ++TD PSV TC +YLKLP YS++EIM ++L+ A E Sbjct: 2500 WAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRK---------------VDATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME 2606
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.947e-12 Identity = 49/125 (39.20%), Postives = 64/125 (51.20%), Query Frame = 2 Query: 119 LAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS 493 L + + GY A I E+M F+ + Q+ F +FVTG R P G L P I R A +ASN + D LP+ TC N LKLPPY +KE++ KL+YAIS + FDLS Sbjct: 917 LRNNTNYAGGYHAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQR-----AAGSASN------ESVDRLPTSATCMNLLKLPPYQSKELLETKLMYAIS-AEAGFDLS 1029
BLAST of DY257384 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4) HSP 1 Score: 69.707 bits (169), Expect = 4.364e-11 Identity = 45/121 (37.19%), Postives = 62/121 (51.24%), Query Frame = 2 Query: 116 ALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAELNPKLTIVRKHSSTAPNTASNGTGPSESTDDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQG 478 AL E ++D GYT S I EI+ FT +Q+R F QF TG R P GGL +L K+ I + T + LP+ TC N L LP YS+KE + ++L+ AI+ +G Sbjct: 769 ALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKL--KMIIAKNGPDT----------------ERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKG 871 The following BLAST results are available for this feature:
BLAST of DY257384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257384 ID=DY257384; Name=DY257384; organism=Citrus sinensis; type=EST; length=1314bpback to top |