GE213298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.420e-33 Identity = 65/72 (90.28%), Postives = 70/72 (97.22%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MSEFD IP+AFDPFAEANAEDSGAG+KDYVH+RVQQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCNGT Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGT 72
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.782e-32 Identity = 63/72 (87.50%), Postives = 70/72 (97.22%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 3.782e-32 Identity = 63/72 (87.50%), Postives = 70/72 (97.22%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCNGT Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGT 72
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.451e-31 Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 74
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.451e-31 Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 74
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.451e-31 Identity = 61/72 (84.72%), Postives = 70/72 (97.22%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MS+ + Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCNGT Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGT 72
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.461e-31 Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MS+ D QIP+AFDPF+EANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 74
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 9.315e-31 Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCNGT Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGT 74
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.303e-24 Identity = 52/72 (72.22%), Postives = 60/72 (83.33%), Query Frame = 3 Query: 243 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 M + D QIP++FDPFAEA D+ +K+YVHIR+QQRNGRKSLTTVQGLKKE SY+KILKDLKK CCNGT Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGT 72
BLAST of GE213298 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.201e-15 Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 273 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 458 +FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CNGT Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGT 72 The following BLAST results are available for this feature:
BLAST of GE213298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
|