FC871532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_ARATH (Probable prefoldin subunit 3 OS=Arabidopsis thaliana GN=At5g49510 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.670e-34 Identity = 68/79 (86.08%), Postives = 76/79 (96.20%), Query Frame = 2 Query: 2 SRARIEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQRRIRQ 238 SRA IEDTDSVCLWLGANVMLEYSC+EA+ LL+ NLENAKASLEVL+ADLQFLRDQVT+TQVT+ARVYNWDVHQRR++Q Sbjct: 106 SRACIEDTDSVCLWLGANVMLEYSCEEASALLKNNLENAKASLEVLVADLQFLRDQVTVTQVTIARVYNWDVHQRRVKQ 184
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_PONAB (Prefoldin subunit 3 OS=Pongo abelii GN=VBP1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19 Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 5 RARIEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQR 226 +A + TD VCLWLGANVMLEY DEA LL+KNL A +L+ L DL FLRDQ T T+V +ARVYNWDV +R Sbjct: 114 KASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_MOUSE (Prefoldin subunit 3 OS=Mus musculus GN=Vbp1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19 Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 5 RARIEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQR 226 +A + TD VCLWLGANVMLEY DEA LL+KNL A +L+ L DL FLRDQ T T+V +ARVYNWDV +R Sbjct: 113 KASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 186
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_HUMAN (Prefoldin subunit 3 OS=Homo sapiens GN=VBP1 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19 Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 5 RARIEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQR 226 +A + TD +CLWLGANVMLEY DEA LL+KNL A +L+ L DL FLRDQ T T+V +ARVYNWDV +R Sbjct: 114 KASVPPTDKMCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_BOVIN (Prefoldin subunit 3 OS=Bos taurus GN=VBP1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19 Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 2 Query: 5 RARIEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQR 226 +A + TD VCLWLGANVMLEY DEA LL+KNL A +L+ L DL FLRDQ T T+V +ARVYNWDV +R Sbjct: 114 KASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLLTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_DICDI (Probable prefoldin subunit 3 OS=Dictyostelium discoideum GN=pfdn3 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.055e-14 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 2 Query: 2 SRARIEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQRR 229 S A++ + S+ LWLGANVMLEYS +EA +L+KN + L I DL F++DQ+T T V V+RVYN+D+ Q+R Sbjct: 107 SSAQVNEPKSIYLWLGANVMLEYSFEEAREVLRKNKDTVDRQLSESIQDLGFVKDQITTTDVNVSRVYNYDIIQKR 182
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_DROME (Probable prefoldin subunit 3 OS=Drosophila melanogaster GN=CG6719 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 5.234e-14 Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 14 IEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQRR 229 + T +V LWLGA+VMLEY DEA LL +N+ +A +L+ + D FLRDQ+T T+V +ARVYNW V +R+ Sbjct: 103 VPPTKTVYLWLGASVMLEYPLDEAEALLNQNITSAVGNLKSVEHDQDFLRDQITTTEVNMARVYNWGVKKRQ 174
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_SCHPO (Probable prefoldin subunit 3 OS=Schizosaccharomyces pombe GN=SPAC3H8.07c PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 2 Query: 2 SRARIEDTDSVCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQRR 229 ++A +E D+V LWLGANVMLEY+ +EA LL + L +A+ +L+ DL+FLR QVT +V ARVYN+ V R+ Sbjct: 90 AKAEVEAKDNVYLWLGANVMLEYTVEEAEALLTQKLNSAEETLKACKEDLEFLRAQVTTMEVNTARVYNYTVLLRK 165
BLAST of FC871532 vs. ExPASy Swiss-Prot
Match: PFD3_YEAST (Prefoldin subunit 3 OS=Saccharomyces cerevisiae GN=PAC10 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 32 VCLWLGANVMLEYSCDEATVLLQKNLENAKASLEVLIADLQFLRDQVTITQVTVARVYNWDVHQRR 229 V LWLGA+VMLEY DEA LL+K L +++ SL V D++FLR+ +T +V AR+YNWDV +R+ Sbjct: 120 VGLWLGADVMLEYPIDEAIELLKKKLADSEQSLTVSTEDVEFLRENITTMEVNCARLYNWDVQRRQ 185 The following BLAST results are available for this feature:
BLAST of FC871532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871532 ID=FC871532; Name=FC871532; organism=Citrus sinensis; type=EST; length=560bpback to top |