DY257271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.026e-43 Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 2 Query: 251 PTLTLLGKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 P GKEHG PEDDIRHAGDL NVNVGDDG +F+++D+QIPL+GPNSI+GRAVV HADPDDLG+GGHEL+ TTGNAGGRV+CG+I L G Sbjct: 61 PHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGLQG 152 HSP 2 Score: 41.9726 bits (97), Expect = 1.026e-43 Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPHFNPA K Sbjct: 49 LGDTTNGCMSTGPHFNPAGK 68 HSP 3 Score: 24.6386 bits (52), Expect = 1.026e-43 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GHHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.335e-43 Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 2 Query: 269 GKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 GKEHG PEDD+RHAGDL N+ VGDDGTATFT++D+QIPLSGPNSI+GRAVV HA+PDDLG+GGHEL+ TTGNAGGRV+CGII L G Sbjct: 67 GKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGLQG 152 HSP 2 Score: 38.5058 bits (88), Expect = 1.335e-43 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPH+NP K Sbjct: 49 LGDTTNGCMSTGPHYNPNGK 68 HSP 3 Score: 24.2534 bits (51), Expect = 1.335e-43 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GLHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.936e-43 Identity = 67/92 (72.83%), Postives = 78/92 (84.78%), Query Frame = 2 Query: 251 PTLTLLGKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 P GKEHG PED+ RHAGDL N+ VGDDGTATFT++D+QIPL+GPNSI+GRAVV HADPDDLG+GGHEL+ TGNAGGRV+CG+I L G Sbjct: 61 PHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGLQG 152 HSP 2 Score: 41.9726 bits (97), Expect = 2.936e-43 Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPHFNPA K Sbjct: 49 LGDTTNGCMSTGPHFNPAGK 68 HSP 3 Score: 24.2534 bits (51), Expect = 2.936e-43 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GLHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.122e-42 Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 2 Query: 251 PTLTLLGKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 P GKEHG P+D++RHAGDL NV VG+DGTA FT+VD QIPL+GP+SIIGRAVV HADPDDLG+GGHEL+ TTGN GGRV+CGI L G Sbjct: 61 PHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKGGHELSKTTGNTGGRVACGINGLQG 152 HSP 2 Score: 40.817 bits (94), Expect = 3.122e-42 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGC+STGPHFNPA K Sbjct: 49 LGDTTNGCLSTGPHFNPAGK 68 HSP 3 Score: 28.1054 bits (61), Expect = 3.122e-42 Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 GPHGFHVHAL Sbjct: 40 GPHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 8.927e-42 Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 2 Query: 269 GKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 GKEHG PED++RHAGDL N+ VG+DGTA+FT+ D QIPL+GP SIIGRAVV HADPDDLG+GGHEL+ TTGNAGGRV+CGII L G Sbjct: 67 GKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152 HSP 2 Score: 40.817 bits (94), Expect = 8.927e-42 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPH+NPA K Sbjct: 49 LGDTTNGCMSTGPHYNPAGK 68 HSP 3 Score: 24.2534 bits (51), Expect = 8.927e-42 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GLHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 1.963e-41 Identity = 64/86 (74.42%), Postives = 76/86 (88.37%), Query Frame = 2 Query: 269 GKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 GKEHG PED++RHAGDL N+ VG+DGTA+FT+ D QIPL+GP SIIGRAVV HADPDDLG+GGHEL+ +TGNAGGR++CGII L G Sbjct: 67 GKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152 HSP 2 Score: 40.817 bits (94), Expect = 1.963e-41 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPH+NPA K Sbjct: 49 LGDTTNGCMSTGPHYNPAGK 68 HSP 3 Score: 24.2534 bits (51), Expect = 1.963e-41 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GLHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 1.963e-41 Identity = 64/86 (74.42%), Postives = 76/86 (88.37%), Query Frame = 2 Query: 269 GKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 GKEHG PED++RHAGDL N+ VG+DGTA+FT+ D QIPL+GP SIIGRAVV HADPDDLG+GGHEL+ +TGNAGGR++CGII L G Sbjct: 67 GKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152 HSP 2 Score: 40.817 bits (94), Expect = 1.963e-41 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPH+NPA K Sbjct: 49 LGDTTNGCMSTGPHYNPAGK 68 HSP 3 Score: 24.2534 bits (51), Expect = 1.963e-41 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GLHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 2.552e-41 Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 2 Query: 269 GKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 GK HG PED RHAGDL N+ VGDDGTATFT+ D+QIPL GPNSI+GRAVV HA+PDDLG+GGHEL+ TTGNAGGRV+CGII L G Sbjct: 67 GKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGLQG 152 HSP 2 Score: 40.0466 bits (92), Expect = 2.552e-41 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPHFNP K Sbjct: 49 LGDTTNGCMSTGPHFNPEGK 68 HSP 3 Score: 24.2534 bits (51), Expect = 2.552e-41 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GLHGFHVHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 3.318e-41 Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 2 Query: 269 GKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 GKEHG PED+ RHAGDL N+NVGDDGT +FT+ DN IPL+G NSIIGRAVV HADPDDLG+GGHEL+ TTGNAGGRV+CGII L G Sbjct: 67 GKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152 HSP 2 Score: 38.1206 bits (87), Expect = 3.318e-41 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGC+STGPHFNP K Sbjct: 49 LGDTTNGCISTGPHFNPNGK 68 HSP 3 Score: 23.8682 bits (50), Expect = 3.318e-41 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFH+HAL Sbjct: 40 GLHGFHIHAL 49
BLAST of DY257271 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 9.484e-41 Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = 2 Query: 269 GKEHGPPEDDIRHAGDLKNVNVGDDGTATFTVVDNQIPLSGPNSIIGRAVVFHADPDDLGQGGHELNFTTGNAGGRVSCGIIDLPG 526 GK HG PED RHAGDL N+ VGDDGTATFT+ D QIPL+GPNSI+GRAVV HADPDDLG+GGHEL+ TGNAGGRV+CGII L G Sbjct: 67 GKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSLATGNAGGRVACGIIGLQG 152 HSP 2 Score: 39.6614 bits (91), Expect = 9.484e-41 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 1 Query: 214 LGNTKNGCMSTGPHFNPARK 273 LG+T NGCMSTGPHFNP K Sbjct: 49 LGDTTNGCMSTGPHFNPDGK 68 HSP 3 Score: 24.2534 bits (51), Expect = 9.484e-41 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 186 GPHGFHVHAL 215 G HGFHVHAL Sbjct: 40 GLHGFHVHAL 49 The following BLAST results are available for this feature:
BLAST of DY257271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257271 ID=DY257271; Name=DY257271; organism=Citrus sinensis; type=EST; length=1221bpback to top |