FC871251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_PRUAR (60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 2.109e-53 Identity = 99/117 (84.62%), Postives = 106/117 (90.60%), Query Frame = 3 Query: 3 TGQSLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 T QSLEGDMA D + TV +P+V KAS RPDIV ++HSN +KNSRQPYA SKKAGHQTSAESWGTGRAV+RIPRVPGGGTHRAGQGAFGNM RGGRMFAPTKIWRRWHRKINVNQKRY Sbjct: 13 TVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRY 129
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4A_ARATH (60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 5.943e-48 Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 3 Query: 3 TGQSLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 T Q+L+GDM+ D SSTV +P+V A RPDIV ++H+ + NSRQPYA SKKAGHQTSAESWGTGRAV+RIPRVPGGGTHRAGQ AFGNM RGGRMFAPTKIWRRWHR++NVN KR+ Sbjct: 11 TIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRH 127
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4B_ARATH (60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=1 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 1.014e-47 Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 3 Query: 3 TGQSLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 T Q L+GDM+ D S+TV +P+V A RPDIV ++H+ + NSRQPYA SKKAGHQTSAESWGTGRAV+RIPRVPGGGTHRAGQ AFGNM RGGRMFAPTKIWRRWHR++NVN KR+ Sbjct: 12 TVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMKRH 128
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4B_XENLA (60S ribosomal protein L4-B (Fragment) OS=Xenopus laevis GN=rpl4-B PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.086e-41 Identity = 79/114 (69.30%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 12 SLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S+ + + V MP V KA RPDIV ++H+N KN+RQPYA SK AGHQTSAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGGRMFAPTK WRRWHR++N QKRY Sbjct: 8 SVYSEKGETSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 121
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.852e-41 Identity = 78/114 (68.42%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 12 SLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S+ + + V MP V +A RPDIV ++H+N KN+RQPYA SK AGHQTSAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGGRMFAPTK WRRWHR++N QKRY Sbjct: 13 SVYSEKGESSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 126
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_RAT (60S ribosomal protein L4 OS=Rattus norvegicus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 5.388e-41 Identity = 77/114 (67.54%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 12 SLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S+ + + V +P V KA RPDIV ++H+N KN+RQPYA S+ AGHQTSAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGGRMFAPTK WRRWHR++N QKRY Sbjct: 9 SVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 122
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_PONAB (60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.388e-41 Identity = 77/114 (67.54%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 12 SLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S+ + + V +P V KA RPDIV ++H+N KN+RQPYA S+ AGHQTSAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGGRMFAPTK WRRWHR++N QKRY Sbjct: 9 SVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 122
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_MOUSE (60S ribosomal protein L4 OS=Mus musculus GN=Rpl4 PE=1 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 5.388e-41 Identity = 77/114 (67.54%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 12 SLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S+ + + V +P V KA RPDIV ++H+N KN+RQPYA S+ AGHQTSAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGGRMFAPTK WRRWHR++N QKRY Sbjct: 9 SVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 122
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_MACFA (60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.388e-41 Identity = 77/114 (67.54%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 12 SLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S+ + + V +P V KA RPDIV ++H+N KN+RQPYA S+ AGHQTSAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGGRMFAPTK WRRWHR++N QKRY Sbjct: 9 SVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 122
BLAST of FC871251 vs. ExPASy Swiss-Prot
Match: RL4_HUMAN (60S ribosomal protein L4 OS=Homo sapiens GN=RPL4 PE=1 SV=5) HSP 1 Score: 166.007 bits (419), Expect = 5.388e-41 Identity = 77/114 (67.54%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 12 SLEGDMAADASSTVPMPEVKKASNRPDIVGYLHSNNTKNSRQPYADSKKAGHQTSAESWGTGRAVTRIPRVPGGGTHRAGQGAFGNM*RGGRMFAPTKIWRRWHRKINVNQKRY 353 S+ + + V +P V KA RPDIV ++H+N KN+RQPYA S+ AGHQTSAESWGTGRAV RIPRV GGGTHR+GQGAFGNM RGGRMFAPTK WRRWHR++N QKRY Sbjct: 9 SVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 122 The following BLAST results are available for this feature:
BLAST of FC871251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871251 ID=FC871251; Name=FC871251; organism=Citrus sinensis; type=EST; length=405bpback to top |