DT214587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: CID11_SCHPO (Poly(A) RNA polymerase cid11 OS=Schizosaccharomyces pombe GN=cid11 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.729e-40 Identity = 91/239 (38.08%), Postives = 142/239 (59.41%), Query Frame = -3 Query: 198 ILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGV-NVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLHGFGSR---NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKL 902 +L S ++ + ++RARVPIVK+ DP I CD+ INN +A +NTK+LR + ID R++ L I+K+WAK R + + GT++SY M ++FLQ R P ILP + + ++ DD + VD + GF + NK S+GRL+ FF Y+ + +Y +V+SVR+G+ ++KQEK W + N +C+E+PF +L D S+K L+ EF+RA +M + N C +L Sbjct: 128 LLYSYGMKQIVCVSRARVPIVKIWDPQFDIHCDLNINNDVAKINTKMLRLFVSIDPRVRPLGLIIKYWAKQRALCDAAGSGTITSYTISCMLVNFLQTRNPPILPAMLDL-----MSNDDNKMF----VDDIVGFKEKATLNKTSLGRLLIDFFYYYGFSFNYLDSVVSVRSGTVLNKQEKGWAMEVNNS---LCVEEPFNTARNLANTADNPSVKGLQSEFQRAFRLMSEN-NACERL 353
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: CID13_SCHPO (Poly(A) RNA polymerase cid13 OS=Schizosaccharomyces pombe GN=cid13 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.318e-39 Identity = 84/229 (36.68%), Postives = 139/229 (60.70%), Query Frame = -3 Query: 213 DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQG-TLSSYAYVLMCIHFLQQRRPAILPCLQGME--KTYSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPN 890 + L+ V ++ A+VPIVK+ D +SCD IN ++ +NT+L+R Y D R++ L ++K+WAK R +N +G TL+SY M I+FLQ+R P ILP LQ + + S D ++ ++FD D +HGFG +N+ES+G L FF ++ Y DY V+S+R G+ +SK+ K W ++ N +C+E+PF + +L D+ ++K ++ EF R ++ ++ N Sbjct: 136 NGLKKVVCISTAKVPIVKVWDSELQLSCDCNINKTISTLNTRLMRSYVLCDPRVRPLIVMIKYWAKRRCLNDAAEGGTLTSYTISCMVINFLQKRDPPILPSLQMLPHLQDSSTMTDGLDVSFFDDPDLVHGFGDKNEESLGILFVEFFRFFGYLFDYEHFVLSIRHGTFLSKRAKGWQFQLNN---FLCVEEPFHTSRNLANTADEITMKGIQLEFRRVFRLLAYNCN 361
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: CID1_SCHPO (Poly(A) RNA polymerase protein cid1 OS=Schizosaccharomyces pombe GN=cid1 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.081e-33 Identity = 87/243 (35.80%), Postives = 132/243 (54.32%), Query Frame = -3 Query: 192 LTRARVPIVKLMDPV-----TGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFL-QQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISV-RTGSTISKQEKDWTR---------RIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM--QHDPNPCVKLFE 866 L RAR+PI+KL CDI NN LA+ NT LL Y ++D RL+ + +VKHWAK + +N Y GTLSSY YVLM +++L +P + P L VD + + D+++ + S+N S+G L+ FF ++AY + V++ R ++KQEK WT +I DR+++ IEDPFE++H++GR V + +R EF A+ ++ + P P LFE Sbjct: 135 LQRARIPIIKLTSDTKNGFGASFQCDIGFNNRLAIHNTLLLSSYTKLDARLKPMVLLVKHWAKRKQINSPYFGTLSSYGYVLMVLYYLIHVIKPPVFPNLLLSPLKQEKIVDGFDVGFDDKLEDIP--PSQNYSSLGSLLHGFFRFYAYKFEPREKVVTFRRPDGYLTKQEKGWTSATEHTGSADQIIKDRYILAIEDPFEISHNVGRTVSSSGLYRIRGEFMAASRLLNSRSYPIPYDSLFE 375
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: TUT7_HUMAN (Terminal uridylyltransferase 7 OS=Homo sapiens GN=ZCCHC6 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.726e-31 Identity = 77/203 (37.93%), Postives = 120/203 (59.11%), Query Frame = -3 Query: 294 LQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQVDKLHGFGS---RNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLG 884 L+N+ +T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K + +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ+D+L + S +N ES+G+L ++ D+ +VIS+R S ++ +K WT + I IEDPF++ H+LG Sbjct: 1093 LRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQIDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSK------YIVIEDPFDLNHNLG 1289 HSP 2 Score: 83.1889 bits (204), Expect = 2.264e-15 Identity = 62/238 (26.05%), Postives = 103/238 (43.28%), Query Frame = -3 Query: 282 SDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG-------MEKTYSVTVDDIE--CAYFDQVDKLHGFGSRNKES-------------------------IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVD 893 SD+ +V A ARVP+V + +G+ C + N A + TK L +++ +L L ++WAK ++ +G L Y + LM I FLQQR+ +LP G + K + + DIE ++ D G KE +G+L ++A + A VIS+R +S++ KDW ++ I IEDP+ V ++ R ++ Sbjct: 379 SDSFIDVDADFHARVPVVVCREKQSGLLCKVSAGNENACLTTKHLTALGKLEPKLVPLVIAFRYWAKLCSIDRPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLGSWIEGFSLSKLGNFNLQDIEKDVVIWEHTDSAAGDTGITKEEAPRETPIKRGQVSLILDVKHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKK------RIAIEDPYSVKRNVARTLN 610
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: TUT7_MOUSE (Terminal uridylyltransferase 7 OS=Mus musculus GN=Zcchc6 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 2.110e-29 Identity = 79/248 (31.85%), Postives = 131/248 (52.82%), Query Frame = -3 Query: 183 LQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQVDKLHGFG---SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM--------QHDPNPCVKLFEPYV 884 L+N+ +T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K + +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ+++L +N E +G+L ++ D+ +VIS+R S ++ +K WT + I IEDPF++ H+LG + + + + F + + +P+ F+P V Sbjct: 1089 LRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIYFFDQINELPTCWPEYGKNTEPVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSK------YIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDNPSKLAYFFDPDV 1330 HSP 2 Score: 86.6557 bits (213), Expect = 2.048e-16 Identity = 64/238 (26.89%), Postives = 105/238 (44.12%), Query Frame = -3 Query: 282 SDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG-------MEKTYSVTVDDIE--CAYFDQVDKLHGFGSRNKES-------------------------IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVD 893 SD+ +V A ARVP+V D +G+ C + N A + TK L +++ RL L ++WAK ++ +G L Y + LM + FLQQR+ +LP G + K + ++ D+E ++ D G S KE +G+L ++A + A VIS+R IS++ KDW ++ I IEDP+ V ++ R ++ Sbjct: 379 SDSFIDVDADFHARVPVVVCRDKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLVPLVIAFRYWAKLCSIDRPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFSLNKLGNFSLKDVEKDSVVWEYTDNSTGDTSSAKEEAPKETAAKKGQVPLTFNIKHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKELISRESKDWPKK------RIAIEDPYSVKRNVARTLN 610
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: TUT4_MOUSE (Terminal uridylyltransferase 4 OS=Mus musculus GN=Zcchc11 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.047e-28 Identity = 77/219 (35.16%), Postives = 121/219 (55.25%), Query Frame = -3 Query: 249 LQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQVD----KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 884 L+N+ +T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK + +G+LSSYAY+LM ++FLQQR+P ++P LQ + ++ VD +FD+ + +L G +N ES+G L ++ D+ VIS+R ++ EK WT + I IEDPF++ H+LG V + + + F Sbjct: 1061 LRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLG-KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSK------CIAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1272
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: TUT4_HUMAN (Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 1.047e-28 Identity = 77/219 (35.16%), Postives = 121/219 (55.25%), Query Frame = -3 Query: 249 LQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQVD----KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 884 L+N+ +T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK + +G+LSSYAY+LM ++FLQQR+P ++P LQ + ++ VD +FD+ + +L G +N ES+G L ++ D+ VIS+R ++ EK WT + I IEDPF++ H+LG V + + + F Sbjct: 1044 LRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLG-KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSK------CIAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1255
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: GLD2B_XENLA (Poly(A) RNA polymerase GLD2-B OS=Xenopus laevis GN=papd4-B PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.786e-28 Identity = 77/218 (35.32%), Postives = 119/218 (54.59%), Query Frame = -3 Query: 240 RARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLH----------GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISK-QEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERA 860 RA+VPIVK D V+G D+ +NN++ + NT LLR YA +D R++ L ++K WA G+N +GTLSSY VLM +H+LQ ILP LQ K Y EC FD+ +LH F S+N+ +G L+ F Y+A D++ ++IS+R + + + +W + IC+E+PF+ ++ V +K ++R EF +A Sbjct: 283 RAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYAYLDKRVRPLVLVIKKWANHHGINDASRGTLSSYTIVLMVLHYLQTLPEPILPSLQ---KKYP------EC--FDRTMQLHLVHQAPRNIPQFLSKNETPLGDLLLGFLKYFAVEFDWSKDIISLREAKALPRTDDYEWRNK------YICVEEPFDGSNTARAVYEKQKFDLIRAEFLKA 483
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: GLD2_DANRE (Poly(A) RNA polymerase GLD2 OS=Danio rerio GN=papd4 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.196e-28 Identity = 74/215 (34.42%), Postives = 112/215 (52.09%), Query Frame = -3 Query: 225 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQE-KDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQ 866 L RA+VPIVK D ++G+ D+ NN + + NT LLR YA ++ R++ L ++K WA +N +GTLSSY VLM +H+LQ ++PCLQ T DI D + F SRN+ S+G L F Y+A + VISVR T+ K K+W + IC+E+PF T+ V ++ + ++ F + ++Q Sbjct: 259 LIRAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYAFVEKRVRPLVLVIKKWANHHCINDASRGTLSSYTLVLMVLHYLQTLPEPVIPCLQRDYPTCFDPKMDIHLVPSGPSD-IPAFVSRNQSSLGDLFLGFLRYYATVFKWDKQVISVRMARTLPKSNCKEWKDK------FICVEEPFNRTNTARAVHERMKFEAIKAAFIESHRLLQ 466
BLAST of DT214587 vs. ExPASy Swiss-Prot
Match: GLD2A_XENLA (Poly(A) RNA polymerase GLD2-A OS=Xenopus laevis GN=papd4-A PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28 Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = -3 Query: 219 RARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFD---QVDKLH-------GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHD 860 RA+VPIVK D V+G D+ +NN++ + NT LLR YA ++ R++ L ++K WA G+N +GTLSSY VLM +H+LQ ILP LQ K Y EC FD Q++ +H + S+N+ +G L+ F Y+A D++ ++ISVR G + + + D+ R IC+E+PF+ T+ V ++ ++R EF +A ++ D Sbjct: 283 RAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYAYLESRVRPLVLVIKKWANHHGINDASRGTLSSYTLVLMVLHYLQTLPEPILPSLQ---KKYP------EC--FDLSMQLNLVHHAPRNIPPYLSKNETPLGDLLLGFLKYFAVEFDWSKDIISVREGKALPRSD-DYLWR----NKYICVEEPFDGTNTARAVYERQKFDMIRAEFLKAWGALRDD 490 The following BLAST results are available for this feature:
BLAST of DT214587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DT214587 ID=DT214587; Name=DT214587; organism=Citrus sinensis; type=EST; length=907bpback to top |