EY680081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_SYNY3 (Peptide chain release factor 2 OS=Synechocystis sp. (strain PCC 6803) GN=prfB PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.109e-22 Identity = 55/159 (34.59%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 + WDD ++ ++L L ++ + + + ++++ I +L E+E D L A + K LD++E+ +LL GP D +GA++TI AG+ G + WAE LL MY RW++K+GY+ + + G+KS T+E E YA+GYL E G H L+ Sbjct: 46 DFWDDTDQAQQILQTLNETKSQLEQWGIWQQQWQDSQAIVELLELED-DQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLV 203
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_SALTO (Peptide chain release factor 2 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=prfB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.892e-22 Identity = 64/192 (33.33%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 +LWDD ++ +V +L+ +N L +LR + ++AK++ +LAE E+ D G ++K +D+ E+ LL G D A V I+AG+ G+ +AE LL MY+RWA++ GY V + + G+KSAT + YA+G LS E+G H L+ F N V +L V++ H P Sbjct: 44 DLWDDQARAQQVTSQLSYVNGEINKLAELRSRLDDAKVLLELAEAES-DPGALTEVEAEVAGLAKAIDEMEVRTLLSGEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIP 234
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CORGL (Peptide chain release factor 2 OS=Corynebacterium glutamicum GN=prfB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.215e-22 Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 100 EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 EA + +LWDDP + +V +L+ + + DLR + E+ ++ +LAE E D + A D+ L+D E+ +L G D A + I++G+ G+ WAE L+ MY RWA+K G++ + D + G+KSAT +Y +G LS E GAH L+ F N V +L V++V P Sbjct: 36 EAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELAEEEDGDTSI---AEEELADLRSLIDALEVKTMLSGEYDAREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIP 231
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CORGB (Peptide chain release factor 2 OS=Corynebacterium glutamicum (strain R) GN=prfB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.215e-22 Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 100 EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 EA + +LWDDP + +V +L+ + + DLR + E+ ++ +LAE E D + A D+ L+D E+ +L G D A + I++G+ G+ WAE L+ MY RWA+K G++ + D + G+KSAT +Y +G LS E GAH L+ F N V +L V++V P Sbjct: 36 EAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELAEEEDGDTSI---AEEELADLRSLIDALEVKTMLSGEYDAREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIP 231
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CYAP8 (Peptide chain release factor 2 OS=Cyanothece sp. (strain PCC 8801) GN=prfB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.389e-22 Identity = 58/166 (34.94%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 100 EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 E + + WD+ + + L +L D V + E+ K I++L E+E D L + A ++ LD++E+ +LL G D +GA +TI AG+ G + WAE LL MY RW +++GY+ + + G+KSAT+E E YA+GYL GE G H L+ Sbjct: 37 EQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQWMGQLEDLKAIAELLELEE-DATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLV 201
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_SALAI (Peptide chain release factor 2 OS=Salinispora arenicola (strain CNS-205) GN=prfB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.092e-21 Identity = 62/192 (32.29%), Postives = 100/192 (52.08%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 +LWDD ++ +V +L+ + L DLR + ++ +++ +LAE E+ D G+ ++K +D+ E+ LL G D A V I+AG+ G+ +AE LL MY+RWA++ GY V + + G+KSAT + YA+G LS E+G H L+ F N V +L V++ H P Sbjct: 44 DLWDDQARAQQVTSQLSYVNGEITKLTDLRSRLDDTQVLLELAEAES-DPGVLTEVAAEITGLAKSIDEMEVRTLLSGEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIP 234
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_RENSM (Peptide chain release factor 2 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=prfB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.732e-21 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 +LWD+P ++ +V KL+ + + L+ L + ++ +++ +LAE E D A + + + K L + E+ LL G D A VTI++G+ G+ +AE LL MY+RWA++ GY V+D + G+KSAT E + YAFG LS E G H L+ Sbjct: 47 DLWDNPAEAQKVTSKLSHAQSKLERLETLTARIDDLEVLVELAESEH-DEDSLAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIRSGAGGVDAADFAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLV 204
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_BEUC1 (Peptide chain release factor 2 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=prfB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.086e-21 Identity = 62/194 (31.96%), Postives = 98/194 (50.52%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFPGT 693 +LWDDP + +V +L+ + + L LR + ++ + + QLA E D A + + + E+ LL G D A VTI++G+ G+ +AE LL MY+RWA+++GY +V+D + G+KSAT E + YAFG LS E G H L+ F N V ++ +++ H P T Sbjct: 43 DLWDDPDAAQKVTSRLSHTQSELERLDTLRSRIDDLETLVQLAAEED-DADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIRSGAGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPET 235
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_THERP (Peptide chain release factor 2 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=prfB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.771e-20 Identity = 54/177 (30.51%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLINFPNGSFPHGVKTTVSIL 651 +LW DP ++ +L +L+ +V + L +++A+ + +L + + D L + + + ++++ + Q E+ LL G D A + + AG+ G+ + WAE LL MY+RWA + G+ VVD + G+KSAT+E YA+GYL GE G H L+ H T+ +++ Sbjct: 43 DLWQDPQRAQSLLRRLSQLRDLVQEWETL---SQQARDLLELRALASDDLELAGQVEQEATELAERVRQLELRLLLTGQYDGHDAILAVHAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGYLKGEAGTHRLVRLSPFDAAHRRHTSFALV 216
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCSS (Peptide chain release factor 2 OS=Mycobacterium sp. (strain MCS) GN=prfB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20 Identity = 67/209 (32.06%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 88 RIKQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEME----AIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFPGT 693 +++QEA + NLWDD +++ +V +L+ + + +++LR + E+ ++ ++A E A + G A A L V ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA++ Y V D + G+KSAT YA+G LS E G H L+ F N S V +L V+ H P T Sbjct: 34 KLEQEAS--DPNLWDDQSRAQKVTSELSHAQNELRRVEELRQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVD--IEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPET 238 The following BLAST results are available for this feature:
BLAST of EY680081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680081 ID=EY680081; Name=EY680081; organism=Citrus sinensis; type=EST; length=897bpback to top |