FC871215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: ASK21_ARATH (SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.741e-70 Identity = 155/274 (56.57%), Postives = 173/274 (63.14%), Query Frame = 1 Query: 1 QVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLLNRLYAXXXXXXXXXXXXXXXXXXXXHVDERSVDDLLSFINGGNGDSKGIKTXXXXXXXXXXXDQLKDSSTNNLNGNHKEFNSLHSAFHNGGLNDIAVSTPHKTSKLQCSTAVTCSPKMEFXXXXXXXXXXPAMKEELDREVEDFARRLNSDWPQRMQEILSLGQDRRLVQVSMNSNCSSRRCT 822 QVPGRSNKERK++DEKFIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL N DDPRIRLLNRLYA HVDERSVDDLLSFING D K +KT +Q SS K+ ++L S + + D S S L +PK EF PA+KE LDREVEDFARRLNS W +LS+GQ+R+ V S+N N +SRR T Sbjct: 80 QVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKNTMDDPRIRLLNRLYA-KKRKELKEREKLKSVEVEEHVDERSVDDLLSFING--RDPKVVKTSKSKKKNKKRKEQKNGSSNGTCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSNLPSMEDDIFTPKTEFEDGYIDDEIDPALKELLDREVEDFARRLNSSW------VLSIGQERQPVNFSINGNGTSRRLT 344
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: ASK20_ARATH (SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 9.866e-63 Identity = 150/278 (53.96%), Postives = 175/278 (62.95%), Query Frame = 1 Query: 1 QVPGRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLNNVTDDPRIRLLNRLYAXXXXXXXXXXXXXXXXXXXXHVDERSVDDLLSFINGGNGDSKGIKTXXXXXXXXXXXDQLKDSSTNNLNGNHKEFNSLHSAFHNGGLNDIAVSTPHKTSKLQCSTAVTCSPKMEFXXXXXXXXXXPAMKEELDREVEDFARRLNSDWPQRMQEILSLGQDRRLVQVSMNSNCSSRRCTSLDS 834 Q+PGRSNKERK +DE+FIRMDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL N DDPRIRLLNRLYA HVDERSVDDLLSFING D K +K DQ K S+NN+ + KE + L S + +I S + L ++ +P PAM+E LDREVEDFA+RLNS+W + SLG++RR V S+N N ++RR T + S Sbjct: 80 QLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLKNSMDDPRIRLLNRLYA-KKRKELKERERLKNVEVEEHVDERSVDDLLSFING--RDHKAVKMSKGKKKKKKKKDQ-KIVSSNNI--HDKESHDLRS--KQQCVEEIGSSMREVPNLLSAEDDIS-TPNAGSEDEDIDDEIDPAMRELLDREVEDFAQRLNSNW------VRSLGKERRPVHFSINGNGTTRRHTGMVS 342
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.012e-11 Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 10 GRSNKERKMFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 G S+++ K +D +FI++D L +L AA+ L +K L+DLT + +A +I+GKTPEEIR+TF++ +D T EE+ E Sbjct: 88 GSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEE 161
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 19 NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 NKE++ ++D++F+++D L EL AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ + Sbjct: 77 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 19 NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 NKE++ ++D++F+++D L EL AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ + Sbjct: 77 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 19 NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 NKE++ ++D++F+++D L EL AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ + Sbjct: 77 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 19 NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 NKE++ ++D++F+++D L EL AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ + Sbjct: 77 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 19 NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 NKE++ ++D++F+++D L EL AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ + Sbjct: 77 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 19 NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 NKE++ ++D++F+++D L EL AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ + Sbjct: 77 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
BLAST of FC871215 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 19 NKERK-----MFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 231 NKE++ ++D++F+++D L EL AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ + Sbjct: 77 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152 The following BLAST results are available for this feature:
BLAST of FC871215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871215 ID=FC871215; Name=FC871215; organism=Citrus sinensis; type=EST; length=839bpback to top |