CX300821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300821 vs. ExPASy Swiss-Prot
Match: YCL3_SCHPO (UPF0652 protein C16A11.03c OS=Schizosaccharomyces pombe GN=SPCC16A11.03c PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.971e-20 Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 3 Query: 3 MTLSYYLHIHTPHYIFMKSLPLFLDNKYYNLFTLVPNSARGADADITNE--TYRLVDTGQGYQRLQGSPRVRREMSEILHRVQTQAG-SWVGLSVVHLGDRDVPNALIFIDKYTQVPRILAPIAQCIEQLPRLVEDSAFHSYVTAEWGSI 443 MT + H H + ++ +F +F L S DA + ++ Y + DTGQG R+Q P VR ++ IL VQ Q W+G SV+HLGDRDVPNAL+FIDKY QVP ILAP+ + ++QL + D Y+ E+GS+ Sbjct: 261 MTGAKLNHDHKTQFFYVDQSLVFWSCMMDQMFLLWLES----DASLLDKHSRYFISDTGQGLNRVQLCPLVRSTVTRILSSVQKQQEIPWMGSSVIHLGDRDVPNALMFIDKYRQVPHILAPLVKVLQQL-EFLRDPYLVQYIENEYGSV 405
BLAST of CX300821 vs. ExPASy Swiss-Prot
Match: YD48_SCHPO (UPF0652 protein C22H10.08 OS=Schizosaccharomyces pombe GN=SPAC22H10.08 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.737e-19 Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 3 Query: 24 HIHTPHYIFMK-SLPLFLDNKYYNLFTLVPNSARGADADITNET--YRLVDTGQGYQRLQGSPRVRREMSEILHRVQTQAGSWVGLSVVHLGDRDVPNALIFIDKYTQVPRILAPIAQCIEQLPRLVEDSAFHSYVTAEWG 437 H HY+ L L + + ++L+ L +D ++TN Y+L+D QG R+Q P +R M IL Q Q+ +W+G S +HLGD VPNAL+FIDKY QVPRIL P+ ++L L D + +Y+ +G Sbjct: 293 HYKQYHYVVQSLHLWLLIMGEIFSLWAL-------SDLELTNPDMEYKLIDNNQGIHRMQPCPNIRIAMERILRTAQEQSETWIGSSTIHLGDTAVPNALLFIDKYMQVPRILTPLVLLFKELDSL-NDHSLLNYIDTAFG 425
BLAST of CX300821 vs. ExPASy Swiss-Prot
Match: U652_DICDI (UPF0652 protein OS=Dictyostelium discoideum GN=DDB_G0293552 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.471e-18 Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 3 Query: 153 YRLVDTGQGYQRLQGSPRVRREMSEILHRVQTQAGS-WVGLSVVHLGDRDVPNALIFIDKYTQVPRILAPIAQCIEQLPRLVE 398 Y+L +TGQG R+Q P V + M IL + Q + G WVG SV+HLGD +VPN+L+FIDKYTQ+ RIL+PI IE +P++ + Sbjct: 514 YQLSNTGQGLNRIQQCPNVGKIMHSILRQTQKKVGDDWVGSSVIHLGDHNVPNSLVFIDKYTQISRILSPIVLTIEYIPKITD 596 The following BLAST results are available for this feature:
BLAST of CX300821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300821 ID=CX300821; Name=CX300821; organism=Citrus sinensis; type=EST; length=444bpback to top |