CX300813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARP5L_RAT (Actin-related protein 2/3 complex subunit 5-like protein OS=Rattus norvegicus GN=Arpc5l PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.060e-13 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ L+ + D + A +L+N+ I + KE +V +V++ ++I V +L +DLLMKYIYK EK + N+ A LL+ H L G+GSI+RVLT RK V Sbjct: 43 EVDGLLRQGDMLRAFHAALRNSPINTKNQAVKERAQGIVLKVLTNFKSSEIEQAVQSLDRNGIDLLMKYIYKGFEKPTE--NSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARPC5_RAT (Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus GN=Arpc5 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 7.915e-13 Identity = 46/113 (40.71%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ + + + AL +L+N I S K+ S+V +V+ DI V +L +DLLMKYIYK E D N+ A LL+ H L GVGSIVRVLT RK V Sbjct: 41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSD--NSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARPC5_PONAB (Actin-related protein 2/3 complex subunit 5 OS=Pongo abelii GN=ARPC5 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 7.915e-13 Identity = 46/113 (40.71%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ + + + AL +L+N I S K+ S+V +V+ DI V +L +DLLMKYIYK E D N+ A LL+ H L GVGSIVRVLT RK V Sbjct: 41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSD--NSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARPC5_HUMAN (Actin-related protein 2/3 complex subunit 5 OS=Homo sapiens GN=ARPC5 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 7.915e-13 Identity = 46/113 (40.71%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ + + + AL +L+N I S K+ S+V +V+ DI V +L +DLLMKYIYK E D N+ A LL+ H L GVGSIVRVLT RK V Sbjct: 41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSD--NSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARP5L_MOUSE (Actin-related protein 2/3 complex subunit 5-like protein OS=Mus musculus GN=Arpc5l PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.915e-13 Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ L+ + D + A +L+N+ I + KE +V +V++ ++I V +L +DLLMKYIYK EK + N+ A LL+ H L G+GSI+RVLT RK V Sbjct: 43 EVDGLLRQGDMLRAFHAALRNSPINTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGIDLLMKYIYKGFEKPTE--NSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARPC5_MOUSE (Actin-related protein 2/3 complex subunit 5 OS=Mus musculus GN=Arpc5 PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 46/113 (40.71%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ + + + AL +L+N I S K+ S+V +V+ DI V +L +DLLMKYIYK E D N+ A LL+ H L GVGSIVRVLT RK V Sbjct: 41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSD--NSSAVLLQWHEKALAAGGVGSIVRVLTARKTV 151
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARPC5_BOVIN (Actin-related protein 2/3 complex subunit 5 OS=Bos taurus GN=ARPC5 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 46/113 (40.71%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ + + + AL +L+N I S K+ S+V +V+ DI V +L +DLLMKYIYK E D N+ A LL+ H L GVGSIVRVLT RK V Sbjct: 41 EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPSD--NSSAVLLQWHEKALAAGGVGSIVRVLTARKTV 151
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARP5L_BOVIN (Actin-related protein 2/3 complex subunit 5-like protein OS=Bos taurus GN=ARPC5L PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ L+ + D + A +L+N+ + + KE +V +V++ ++I V +L +DLLMKYIYK EK + N+ A LL+ H L G+GSI+RVLT RK V Sbjct: 43 EVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGIDLLMKYIYKGFEKPTE--NSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARP5L_PONAB (Actin-related protein 2/3 complex subunit 5-like protein OS=Pongo abelii GN=ARPC5L PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ L+ + D + A +L+N+ + + KE +V +V++ ++I V +L +DLLMKYIYK EK + N+ A LL+ H L G+GSI+RVLT RK V Sbjct: 43 EVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPTE--NSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
BLAST of CX300813 vs. ExPASy Swiss-Prot
Match: ARP5L_HUMAN (Actin-related protein 2/3 complex subunit 5-like protein OS=Homo sapiens GN=ARPC5L PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 45 EVERLIMRKDKVNALVLSLQNTNITNASDKAKELQASLVDRVVSQLGEADIPNVVNALSLEALDLLMKYIYKFMEKTGDKNNNFAFLLKLHAAVLDKAGVGSIVRVLTERKQV 383 EV+ L+ + D + A +L+N+ + + KE +V +V++ ++I V +L +DLLMKYIYK EK + N+ A LL+ H L G+GSI+RVLT RK V Sbjct: 43 EVDGLLRQGDMLRAFHAALRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPTE--NSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153 The following BLAST results are available for this feature:
BLAST of CX300813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300813 ID=CX300813; Name=CX300813; organism=Citrus sinensis; type=EST; length=424bpback to top |