CX300809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 9.541e-59 Identity = 106/139 (76.26%), Postives = 122/139 (87.77%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+ K AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG ARV+IGQ+LLSVRCK+S H EALRRAK+KFPGRQKI+ S+ WGFTKF +E+Y KLK Sbjct: 47 PYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 9.541e-59 Identity = 106/139 (76.26%), Postives = 122/139 (87.77%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+ K AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG ARV+IGQ+LLSVRCK+S H EALRRAK+KFPGRQKI+ S+ WGFTKF +E+Y KLK Sbjct: 47 PYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_DICDI (60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=3 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 1.055e-57 Identity = 105/139 (75.54%), Postives = 120/139 (86.33%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHL+SLEKEQLSSEA+EA RISCNKYI K GKD FHMRVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKP G VARVNIGQI+ S+R + + + +V EALRR+ YKFPGRQKIV+SK WGFT + +E YQKLK Sbjct: 47 PLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.799e-57 Identity = 104/139 (74.82%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+ K AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG+ ARV IGQ+LLSVRCK H EALRRAK+KFPGRQKI++S+ WGFTKF + DY K K Sbjct: 47 PFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.069e-57 Identity = 103/139 (74.10%), Postives = 121/139 (87.05%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+ KFAGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG+ ARV IGQ+LLSVRCK + + EALRRAK+KFPGRQKI++S+ WGFTK + DY +LK Sbjct: 47 PFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYPRLK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 4.009e-57 Identity = 103/139 (74.10%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+ K+AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG ARV+IGQ+LLSVRCK H EALRRAK+KFP RQKI++S+ WGFTKF + DY K K Sbjct: 47 PFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYIKWK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL102_ORYSJ (60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.523e-56 Identity = 101/137 (73.72%), Postives = 121/137 (88.32%), Query Frame = 1 Query: 7 CVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 CVHLVS EKE ++SEALEA+RI+CNKY+ K AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG ARV+IGQ+LLSVRCK + H +EALRRAK+KFPGRQKI+ S+ WGFTKF +++Y +LK Sbjct: 49 CVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL102_ORYSI (60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 1.523e-56 Identity = 101/137 (73.72%), Postives = 121/137 (88.32%), Query Frame = 1 Query: 7 CVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 CVHLVS EKE ++SEALEA+RI+CNKY+ K AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG ARV+IGQ+LLSVRCK + H +EALRRAK+KFPGRQKI+ S+ WGFTKF +++Y +LK Sbjct: 49 CVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 3.393e-56 Identity = 102/139 (73.38%), Postives = 118/139 (84.89%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS E+E +SSEALEA+RI CNKY+ K AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG ARV+IGQ+LLSVRCK + H +EALRRAK+KFP RQKI+ S+ WGFTKF + DY K K Sbjct: 47 PYCVHLVSWERENVSSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 4.432e-56 Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+VK AGKD FH+R+RVHP+HVLRINKMLSCAGADR+Q+GMRGAFGK G ARV IGQ+LLSVRCK + H EALRRAK+KFPGRQKI++S+ WGFTKF + DY KL+ Sbjct: 47 PYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLR 185 The following BLAST results are available for this feature:
BLAST of CX300809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300809 ID=CX300809; Name=CX300809; organism=Citrus sinensis; type=EST; length=420bpback to top |