CX300806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_SPOFR (60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 4.777e-42 Identity = 83/139 (59.71%), Postives = 112/139 (80.58%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKD-DKKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++HKH + R + KSQD Y+RLLV+LY++L+RRT+S FN ++L+RL MSR+NRPPLS+S+++ ++K + IAV+VGT+TND RL +VPK+++AAL VTE ARARI+ AGG I+T DQLAL PTGA TVLL Sbjct: 1 MGIDINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRPPLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGEILTFDQLALRAPTGAKTVLL 139
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_PLUXY (60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.044e-41 Identity = 81/139 (58.27%), Postives = 111/139 (79.86%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKD-DKKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++HKH + R + KSQD Y+RLLV+LY++L+RRT++ FN++VL+RL MSR+NRPPLS+S+++ ++K + IAV+VGT+TND RL +VPK+ +AAL VTE ARARI+ AGG I+T DQLAL PTG TVL+ Sbjct: 1 MGIDINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPLSLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGEILTFDQLALRAPTGRKTVLI 139
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_DROME (60S ribosomal protein L18 OS=Drosophila melanogaster GN=RpL18 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 4.044e-41 Identity = 80/139 (57.55%), Postives = 108/139 (77.70%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKDD-KKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++HK+ + R +PKSQD Y+RLLV+LY+FL RRT+ FNR++LKRL MS++NRPPLS+ +I+ + K + + V+VGTVT+D RLL VPKL + AL VT++AR RI+KAGG ++T DQLAL PTG NT+LL Sbjct: 1 MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLL 139
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_TIMBA (60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 80/140 (57.14%), Postives = 114/140 (81.43%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKDDKKI--AVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++HK+ + R +PKSQD Y+RLLV+LY++L+RRT + FN+++LKRL MS++ RPP+S+SK+ ++K K +++ AVIVGTVT+D R+ E+PKL+I AL+VT++ARA I+KAGG +IT DQLAL PTG+ TVLL Sbjct: 1 MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRPPISLSKVVRFMK-KPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLL 139
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_DROPS (60S ribosomal protein L18 OS=Drosophila pseudoobscura pseudoobscura GN=RpL18 PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 79/138 (57.25%), Postives = 107/138 (77.54%), Query Frame = 2 Query: 8 GIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKDD-KKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 GID++HK+ + R +PKSQD Y+RLLV+LY+FL RRT+ FNR++LKRL MS++NRPPLS+ +I+ + K + + V+VGTVT+D RLL VPKL + AL VT++AR RI+KAGG ++T DQLAL PTG NT+LL Sbjct: 3 GIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLSLQRIARFFKAANQPESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEVLTFDQLALKSPTGKNTLLL 140
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_BOMMO (60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40 Identity = 80/139 (57.55%), Postives = 111/139 (79.86%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKD-DKKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++HKH + R + KSQD Y+RLLV+LY++L+RRT++ FN++VL+RL MSR+NRPP+S+S+++ ++K + IAV+VGTVTND RL ++PK+ +AAL VTE ARARI+ AGG I+T DQLAL PTG TVL+ Sbjct: 1 MGIDINHKHDRKVRRTEVKSQDIYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 139
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_AEDAE (60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.537e-40 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLK--GKDDKKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++HK + R PKS D Y+RLLV+LY+FL RRT FN+++L+RL MSR N+PP+S+S+++ +K GKD+ IAV+VGTVTND+R L PK+N+ AL+VTE AR RI+K GG I T DQLAL PTG NTVL+ Sbjct: 1 MGIDINHKWDRKVRRTKPKSLDVYLRLLVKLYRFLYRRTHKKFNKIILRRLFMSRTNQPPISLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGGKIYTFDQLALVAPTGKNTVLM 140
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18B_SCHPO (60S ribosomal protein L18-B OS=Schizosaccharomyces pombe GN=rpl18b PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.537e-40 Identity = 83/141 (58.87%), Postives = 109/141 (77.30%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKD---DKKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++ H + R P S++ Y++LLV+LY+FL+RRT S FN+ +LKRL S+ NRPP+SISKI++ K + K VIVGTVT+DERLL VPKL++AAL+ T+SARARI+KAGG ++TLDQLAL PTG+NTVLL Sbjct: 1 MGIDIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLL 141
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18_ANOGA (60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 2.007e-40 Identity = 78/140 (55.71%), Postives = 107/140 (76.43%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLK--GKDDKKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++HK + R PKS D Y+ LLV+LY+FL RRT FN++V++RL MSR N PP+S+++++ +K GKD+K +AV++GTVTND R+++VPKLN+ AL+VT+ AR RI+K GG I T DQLAL PTG NTVL+ Sbjct: 1 MGIDINHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHPPMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGGKIYTFDQLALLSPTGRNTVLM 140
BLAST of CX300806 vs. ExPASy Swiss-Prot
Match: RL18A_SCHPO (60S ribosomal protein L18-A OS=Schizosaccharomyces pombe GN=rpl18a PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40 Identity = 82/141 (58.16%), Postives = 108/141 (76.60%), Query Frame = 2 Query: 5 MGIDLDHKHKKNKNRIDPKSQDPYVRLLVRLYKFLSRRTSSNFNRVVLKRLTMSRLNRPPLSISKISSYLKGKD---DKKIAVIVGTVTNDERLLEVPKLNIAALKVTESARARIVKAGGSIITLDQLALSRPTGANTVLL 418 MGID++ H K R P S++ Y++LLV+LY+FL+RRT S FN+ +LKRL S+ NRPP+SISKI++ K K V+VGTVT+DER+L VPKL+IAAL+ T+SARARI+KAGG ++TLDQLAL PTG+NTVL+ Sbjct: 1 MGIDIERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLV 141 The following BLAST results are available for this feature:
BLAST of CX300806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300806 ID=CX300806; Name=CX300806; organism=Citrus sinensis; type=EST; length=418bpback to top |