CX300804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.395e-17 Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = -3 Query: 224 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRT 382 RGVAMNPV+HPHGGGN QH+G TVRRDK AGAK GQI+ARRTGR RG+ T Sbjct: 201 RGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIAARRTGRRRGAAAT 253
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQE 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQE 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_RAT (60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQE 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_MOUSE (60S ribosomal protein L8 OS=Mus musculus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQE 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_HUMAN (60S ribosomal protein L8 OS=Homo sapiens GN=RPL8 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQE 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_BOVIN (60S ribosomal protein L8 OS=Bos taurus GN=RPL8 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQE 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_ICTPU (60S ribosomal protein L8 OS=Ictalurus punctatus GN=rpl8 PE=2 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 1.570e-16 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDVPAGRKVGLIAARRTGRLRGTKTVQE 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_DANRE (60S ribosomal protein L8 OS=Danio rerio GN=rpl8 PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.050e-16 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = -3 Query: 233 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGS 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ARRTGR+RG+ Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGT 249
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_PONAB (60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.497e-16 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HP GGGN QH+GKP T+RRD PAG K G I+ RRTGR+RG+ E Sbjct: 200 RGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAVRRTGRLRGTKTVQE 254 The following BLAST results are available for this feature:
BLAST of CX300804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300804 ID=CX300804; Name=CX300804; organism=Citrus sinensis; type=EST; length=384bpback to top |