CX300734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 7.505e-56 Identity = 102/142 (71.83%), Postives = 120/142 (84.51%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP GLR RKLKNHRRE+RW K Y K+H + K+NP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVPRDGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYK KKE+PRS Sbjct: 2 GKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVASVSLLALYKQKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_ICTPU (40S ribosomal protein S23 OS=Ictalurus punctatus GN=rps23 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 3.725e-55 Identity = 101/142 (71.13%), Postives = 121/142 (85.21%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GK GLR RKL++HRRE++W KQY KAH + +KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYKGKKE+PRS Sbjct: 2 GKCRGLRTARKLRDHRREQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_RAT (40S ribosomal protein S23 OS=Rattus norvegicus GN=Rps23 PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 8.298e-55 Identity = 100/142 (70.42%), Postives = 121/142 (85.21%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GK GLR RKL++HRR+++W KQY KAH + +KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYKGKKE+PRS Sbjct: 2 GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_MOUSE (40S ribosomal protein S23 OS=Mus musculus GN=Rps23 PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 8.298e-55 Identity = 100/142 (70.42%), Postives = 121/142 (85.21%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GK GLR RKL++HRR+++W KQY KAH + +KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYKGKKE+PRS Sbjct: 2 GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_HUMAN (40S ribosomal protein S23 OS=Homo sapiens GN=RPS23 PE=1 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 8.298e-55 Identity = 100/142 (70.42%), Postives = 121/142 (85.21%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GK GLR RKL++HRR+++W KQY KAH + +KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYKGKKE+PRS Sbjct: 2 GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_CHILA (40S ribosomal protein S23 OS=Chinchilla lanigera GN=RPS23 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 8.298e-55 Identity = 100/142 (70.42%), Postives = 121/142 (85.21%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GK GLR RKL++HRR+++W KQY KAH + +KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYKGKKE+PRS Sbjct: 2 GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_BOVIN (40S ribosomal protein S23 OS=Bos taurus GN=RPS23 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 8.298e-55 Identity = 100/142 (70.42%), Postives = 121/142 (85.21%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GK GLR RKL++HRR+++W KQY KAH + +KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYKGKKE+PRS Sbjct: 2 GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_ASPFU (40S ribosomal protein S23 OS=Aspergillus fumigatus GN=rps23 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 8.298e-55 Identity = 101/144 (70.14%), Postives = 120/144 (83.33%), Query Frame = 1 Query: 22 GKGKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKGKP GL A RKL NHRRE+RW+ Y K + K++P GG+ +KGIV+EK+G+EAKQPNSAIRK V+VQLIKNGKK+ FVP DGCLNF+DENDEVL++GFG++GK+KGDIPG RFKVVKVSGV LLAL+K KKEKPRS Sbjct: 2 GKGKPRGLNAARKLSNHRREQRWADLHYKKRLLGTAFKSSPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVKVQLIKNGKKVTAFVPNDGCLNFIDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_PIG (40S ribosomal protein S23 OS=Sus scrofa GN=RPS23 PE=2 SV=3) HSP 1 Score: 211.846 bits (538), Expect = 1.415e-54 Identity = 100/142 (70.42%), Postives = 120/142 (84.51%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GK GLR RKL++HRR+ +W KQY KAH + +KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNF++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYKGKKE+PRS Sbjct: 2 GKCRGLRTARKLRSHRRDHKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_NEUCR (40S ribosomal protein S23 OS=Neurospora crassa GN=rps-23 PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.153e-54 Identity = 102/142 (71.83%), Postives = 119/142 (83.80%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP GL A RKL+N+RRE+RWS Y K + K++P GGS +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKK+ FVP DGCLNFVDENDEVL++GFG++GK+KGDIPG RFKVVKVSGV LLAL+K KKEKPRS Sbjct: 4 GKPRGLNAARKLRNNRREQRWSDLHYKKRALGTAFKSSPFGGSSHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145 The following BLAST results are available for this feature:
BLAST of CX300734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300734 ID=CX300734; Name=CX300734; organism=Citrus sinensis; type=EST; length=506bpback to top |