CN189546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189546 vs. ExPASy Swiss-Prot
Match: PFD4_AVEFA (Probable prefoldin subunit 4 OS=Avena fatua GN=VIP3 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.072e-41 Identity = 81/125 (64.80%), Postives = 99/125 (79.20%), Query Frame = 3 Query: 57 EQAEKSDTVVTWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDEDIVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 431 +Q + ++ VTWEDQQNIN+F +LNNRFHEL DEI+ AKE N+NLEDAGNELIL DED+VRFQIGEVFAH+P ++VE R+E+MKE + +LAQM ELKKILYGKF+D+INLEED Sbjct: 2 QQGDGTEAQVTWEDQQNINRFGRLNNRFHELTDEIRLAKEANENLEDAGNELILCDEDVVRFQIGEVFAHMPMDDVEARLEQMKEDAAKKLERLEEEKESILAQMAELKKILYGKFKDAINLEED 126
BLAST of CN189546 vs. ExPASy Swiss-Prot
Match: PFD4_ARATH (Probable prefoldin subunit 4 OS=Arabidopsis thaliana GN=API3 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38 Identity = 78/120 (65.00%), Postives = 93/120 (77.50%), Query Frame = 3 Query: 72 SDTVVTWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDEDIVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 431 S+ VTWEDQQNIN FS+LNNR H+L+D+IK AKE +NLEDAGNELIL DE++VRFQIGEVFAHVPR++VET+IEEMKE ++ QM LKK+LY KF+DSINLEED Sbjct: 9 SEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILADEEMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKFKDSINLEED 128
BLAST of CN189546 vs. ExPASy Swiss-Prot
Match: PFD4_HUMAN (Prefoldin subunit 4 OS=Homo sapiens GN=PFDN4 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.723e-15 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 57 EQAEKSDTVVTWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDED--IVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 431 ++A D VT+EDQQ INKF++ +R EL++EI+ K+ NLEDA ++++L D+D ++ +QIG+VF +EE + +EE K+ + + +LK LY KF +INLE D Sbjct: 6 KKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEAD 132
BLAST of CN189546 vs. ExPASy Swiss-Prot
Match: PFD4_BOVIN (Prefoldin subunit 4 OS=Bos taurus GN=PFDN4 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 57 EQAEKSDTVVTWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDED--IVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEED 431 ++A D VT+EDQQ INKF++ +R EL++EI+ K+ NLEDA +++L D+D ++ +QIG+VF +EE + +EE K+ + + +LK LY KF +INLE D Sbjct: 6 KKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEAD 132
BLAST of CN189546 vs. ExPASy Swiss-Prot
Match: PFD4_YEAST (Prefoldin subunit 4 OS=Saccharomyces cerevisiae GN=GIM3 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13 Identity = 42/123 (34.15%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 60 QAEKSDTVVTWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDED-IVRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLE 425 Q ++++T VT+EDQQ IN+FSKL R + E+ +E + L+D E+ L DED V++++G++F + + +V ++E+ E + ++++ LK ILY KF D+INLE Sbjct: 6 QGQRNNTQVTFEDQQKINEFSKLIMRKDAIAQELSLQREEKEYLDDVSLEIELIDEDEPVQYKVGDLFIFMKQSKVTAQLEKDAERLDNKIETLEDKQRDIDSRLDALKAILYAKFGDNINLE 128
BLAST of CN189546 vs. ExPASy Swiss-Prot
Match: PFD4_DICDI (Probable prefoldin subunit 4 OS=Dictyostelium discoideum GN=pfdn4 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.365e-12 Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 45 TMQHEQAEKSDTVVTWEDQQNINKFSKLNNRFHELEDEIKFAKETNDNLEDAGNELILTDEDI-VRFQIGEVFAHVPREEVETRIEEMKEVNSXXXXXXXXXXXXVLAQMNELKKILYGKFRDSINLEE 428 TM + E +T V DQ+ IN F +LNNR HEL E K +E + D+ ++L + D+D ++ +GE F V +E+ E+ IE+ + + ELK ILY KF++SINLEE Sbjct: 4 TMIEKVDEVLETEVCAADQKMINLFGRLNNRKHELMREKKAKQEDLEKATDSQDDLFIADDDSKFKYSMGEAFLEVNKEDAESLIEKYINKLEEDIKKIDSDINDINEKHKELKVILYAKFKNSINLEE 132 The following BLAST results are available for this feature:
BLAST of CN189546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189546 ID=CN189546; Name=CN189546; organism=Citrus sinensis; type=EST; length=656bpback to top |