CX286800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: GYP7_YARLI (GTPase-activating protein GYP7 OS=Yarrowia lipolytica GN=GYP7 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19 Identity = 48/165 (29.09%), Postives = 92/165 (55.76%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLL 496 LSP+ V+++D AFW F+ FM++ N+ D+ G+R QL + +++ LY+HLE+ ++ + FF +RM++V F+REL+++ L LWEV+W D + +L+ A + + + ++I+ + DEI++ N ++ +D+ +LL Sbjct: 523 LSPLYVVLQDDTLAFWAFSAFMERMERNYLRDQSGMRNQLLCLDHLVQFMLPSLYKHLEKTESTNLFFFFRMLLVWFKRELLWDDVLRLWEVLWTDYL--------------------SSQFVLFVCLAILDKHKDVMIDHLAGFDEILKYMNELSMTIDLDELL 667
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: TBC15_HUMAN (TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.339e-15 Identity = 46/165 (27.88%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLL 496 LSP+ VME + +AFWCFA +M + NF G++ QL +S +++ D+ +LE + +F +R +++ F+RE F L LWEV+W + P + L A + ++ I+EK+ +EI++ N ++ +DV +L Sbjct: 460 LSPLLYVMENEVDAFWCFASYMDQMHQNFEEQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMWTEL--------------------PCTNFHLLLCCAILESEKQQIMEKHYGFNEILKHINELSMKIDVEDIL 604
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: GYP7_DEBHA (GTPase-activating protein GYP7 OS=Debaryomyces hansenii GN=GYP7 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.055e-15 Identity = 40/165 (24.24%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLL 496 LSP+ +++ FW F FM + NF D+ G++ Q+ ++++++ L++HLE+ ++ D +F +RM++V F+RE + L LWE++W D + L+ A + ++I + S DE+++ N ++ ++++ LL Sbjct: 544 LSPLYVTFQDESLTFWAFVNFMDRMERNFLRDQSGMKNQMLTLNELVQFMLPDLFKHLEKCESTDLYFFFRMLLVWFKREFEWSSVLSLWEILWTDYY--------------------SGQFHLFFALAVLSDNERIIRQNLSRFDEVLKYMNDLSMNMNLNHLL 688
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: TBC15_MOUSE (TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.161e-14 Identity = 45/165 (27.27%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLL 496 LSP+ VME + +AFWCFA +M + NF G++ QL +S +++ D+ +LE + +F +R +++ F+RE F L LWEV+W + P + L A + ++ I+ K+ +EI++ N ++ +DV +L Sbjct: 443 LSPLLYVMENEVDAFWCFASYMDQMHQNFEEQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMWTEL--------------------PCKNFHLLLCCAILESEKQQIMAKHYGFNEILKHINELSMKIDVEDIL 587
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: GYP7_SCHPO (GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe GN=gyp7 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.524e-14 Identity = 44/159 (27.67%), Postives = 81/159 (50.94%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHL 478 L+PI ++ FW G MK+ NF D+ G+ RQL + +I+ D L+ HLE+ + + F +RM+++ F+RE +E L LW+V++ + + I + YAIA + R++++ + S+ DE+++ N ++G L Sbjct: 537 LAPIYVTFNDNALTFWGMVGLMKRLHFNFLRDQSGMHRQLDTLRLLIEFMDPELFAHLEKTDSSNLFCFFRMLLIYFKREFDWEVLLKLWDVLFTNYLSYDYHI-----------------FVAYAIAE---RHREVLLNQTSAFDEVLKYFNELSGKL 675
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: GYP7_YEAST (GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae GN=GYP7 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.676e-13 Identity = 42/160 (26.25%), Postives = 75/160 (46.88%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLD 481 LSPI +M+E+ + FWCF FM NF D+ GI Q+ + ++++ L HL + + + FF +RM++V F+RE E + +WE W + L+ + A + + + I++ + D+I++ N + G LD Sbjct: 537 LSPIYVIMKEEWKTFWCFTHFMDIMERNFLRDQSGIHEQMLTLVELVQLMLPELSEHLNKCDSGNLFFCFRMLLVWFKREFEMEDIMHIWENFWTFYY--------------------SSQFQLFFMLAILQKNSQAILQHLNQFDQILKFFNELNGKLD 676
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: GYP7_CANGA (GTPase-activating protein GYP7 OS=Candida glabrata GN=GYP7 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.676e-13 Identity = 32/96 (33.33%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWAD 289 LSP+ ++ ++ FWCF FM++ NF D+ GIR Q+ ++ + + L HL++ + D FF +RM++V F+RE ++ +WEV + D Sbjct: 527 LSPLYYIIRDEETTFWCFTNFMERMERNFLRDQSGIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFFCFRMLLVWFKREFNYDDIFNIWEVFFTD 622
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: TBC17_MOUSE (TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.734e-13 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDLVVTLHA 532 LSPI V++ + +AFWCF GFM+ NF + ++RQL + +++ D L L+ + F +R +++ F+RE F L LWEV+W P + LL A A ++R L++ + S +EI++ N + L V +L A L L A Sbjct: 424 LSPILFVVQNEVDAFWCFCGFMELVHGNFEESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTG-------------------LPGPNLHLLVACAILDMERDTLMLSGFGS-NEILKHINELTMKLSVEDVLTRAEALYRQLTA 580
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: TBC17_HUMAN (TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.319e-13 Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 2 Query: 2 LSPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWADQAAIRAGIAKSAWGRMRLRAPPTDDLLLYAIAACVLQRRKLIIEKYSSMDEIMRECNSMAGHLDVWKLLDDAHDL 514 LSPI V++ + +AFWCF GFM+ + NF + ++RQL + +++ D L L+ + F +R +++ F+RE F L LWEV+W P + LL A A ++R L++ + S +EI++ N + L V +L A L Sbjct: 424 LSPILYVIQNEVDAFWCFCGFMELVQGNFEESQETMKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTG-------------------LPGPNLHLLVACAILDMERDTLMLSGFGS-NEILKHINELTMKLSVEDVLTRAEAL 574
BLAST of CX286800 vs. ExPASy Swiss-Prot
Match: TBC25_MOUSE (TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11 Identity = 31/94 (32.98%), Postives = 54/94 (57.45%), Query Frame = 2 Query: 5 SPIASVMEEDHEAFWCFAGFMKKARHNFRLDEVGIRRQLSIVSKIIKCKDNHLYRHLEQLQAEDCFFVYRMVVVLFRRELIFEQTLCLWEVIWA 286 SPI +VM+ + AF CF G MK+ NF D + + + + +++ D Y++L++ A+D FF YR +++ +RE F+ L + EV W+ Sbjct: 393 SPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWS 486 The following BLAST results are available for this feature:
BLAST of CX286800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286800 ID=CX286800; Name=CX286800; organism=Citrus clementina; type=EST; length=588bpback to top |