CX287378
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 3.286e-35 Identity = 78/103 (75.73%), Postives = 91/103 (88.35%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAV-QKDDGSAV--SRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MASTQCFLH HALS++ ART+SS QR+VS++KP Q+VCRAQKQ+ Q+DDG++V SRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL Y Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSRRLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAY 103
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 1.526e-32 Identity = 72/100 (72.00%), Postives = 84/100 (84.00%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQKDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MA + CFLH AL+++ AR+SSS QRHVS KP QI+C+AQ+ +DD SAVSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPY Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPY 98
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.204e-31 Identity = 72/99 (72.73%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQKDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MAST CFLHHHAL T AR+SSS R + K P +VCRAQKQ Q+++G VSRRLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY Sbjct: 1 MASTSCFLHHHAL-TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALTVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPY 98
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.759e-31 Identity = 73/101 (72.28%), Postives = 83/101 (82.18%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQKDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MASTQCFLHHHALST PART + V ++KP Q+ VCRAQKQ+ ++D +VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF Y Sbjct: 1 MASTQCFLHHHALST-PARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTY 100
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.413e-31 Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 1 Query: 112 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQKDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 ASTQCFLH +HAL ++PARTSS V + KP Q++CRAQKQ + +AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPY Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPY 95
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.094e-30 Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 112 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQKDDGS--AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 ASTQCFLH +HAL ++PARTSS VS+ KP Q++CRAQKQ DD S AVSRRLALT+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPY Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLALTLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPY 93
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_SPIOL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.866e-30 Identity = 71/102 (69.61%), Postives = 84/102 (82.35%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPA--RTSSSQRHVS-NIKPTQIVCRAQKQAVQKDD--GSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MAST CFLHHHA ++PA R S++QR+ + +IKP QIVC+AQKQ + + S VSRRLALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PY Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPY 102
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.183e-30 Identity = 71/97 (73.20%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQKDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MASTQCFLHH TTP RT S QR V KP IVC+AQKQ D + VSRRLAL+VLIGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPY Sbjct: 1 MASTQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSVLIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPY 94
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP3_TOBAC (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.024e-28 Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQ-KQAVQKDDGS---AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MASTQCFLHHHALST PARTS + V ++K Q+ VCRAQ KQ+ + D +VSRRLALT+LIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF Y Sbjct: 1 MASTQCFLHHHALST-PARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRLALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTY 101
BLAST of CX287378 vs. ExPASy Swiss-Prot
Match: PSBP_FRIAG (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.281e-28 Identity = 65/100 (65.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 109 MASTQCFLHHHALSTTPARTSSSQRH--VSNIKPTQIVCRAQKQA-VQKDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPY 399 MAS+ CFL HHA ST PA TS + H V IKP+Q++CRAQK + ++ +AVSRRLALT+LIG+AAVG+K++PA+AAYGE+ANVFGK KTNTDFLPY Sbjct: 1 MASSACFLLHHAPST-PATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLALTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPY 99 The following BLAST results are available for this feature:
BLAST of CX287378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287378 ID=CX287378; Name=CX287378; organism=Citrus clementina; type=EST; length=400bpback to top |