CX287383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: NLAL1_ARATH (Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Arabidopsis thaliana GN=At3g03920 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.767e-32 Identity = 63/73 (86.30%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 187 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 EGPP+EVVEV++F+HACEGDAVTKL+ EKIP+FNAPIYL+NKTQIGKVDEIFGPINES FS+KMMEGIVATSY Sbjct: 52 EGPPSEVVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLFSIKMMEGIVATSY 124
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: NLAL2_ARATH (H/ACA ribonucleoprotein complex subunit 1-like protein 2 OS=Arabidopsis thaliana GN=At5g18180 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.465e-30 Identity = 62/73 (84.93%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 187 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 EGPP+EVVEV++FLHACEGDAV KL+N KIP+FNAPIYLQNKTQIG+VDEIFGPINES FS+KM EGIVATSY Sbjct: 39 EGPPSEVVEVATFLHACEGDAVFKLSNVKIPHFNAPIYLQNKTQIGRVDEIFGPINESLFSIKMREGIVATSY 111
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_NEOFI (H/ACA ribonucleoprotein complex subunit 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=gar1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.676e-24 Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 190 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 GPPA+V+E+ +F+HACEG+ V + N KIPYFNAPIYL+NKT IGKVDE+ GPIN+ YF++K EGIVATS+ Sbjct: 35 GPPAQVLEMGTFMHACEGEMVCESVNPKIPYFNAPIYLENKTPIGKVDEVLGPINQVYFTIKPQEGIVATSF 106
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_COCIM (H/ACA ribonucleoprotein complex subunit 1 OS=Coccidioides immitis GN=GAR1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.328e-23 Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 190 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 GPP V+E+ SF+HACEG+ V + N KIPYFNAPIYL+NKT +GKVDE+ GPIN+ YF++K EGIVATS+ Sbjct: 35 GPPTTVLEMGSFMHACEGEMVCESINPKIPYFNAPIYLENKTPVGKVDEVLGPINQVYFTIKPQEGIVATSF 106
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_CANGA (H/ACA ribonucleoprotein complex subunit 1 OS=Candida glabrata GN=GAR1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.046e-23 Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 187 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 +GPP V+E+ F+H CEGD V + N K+PYFNAPIYL+NKTQ+GKVDEI GP+NE YF++K EG+ ATS+ Sbjct: 32 QGPPDTVLEMGEFMHPCEGDVVCRSINTKVPYFNAPIYLENKTQVGKVDEILGPLNEVYFTIKCGEGVQATSF 104
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_SCHPO (H/ACA ribonucleoprotein complex subunit 1 OS=Schizosaccharomyces pombe GN=gar1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.590e-23 Identity = 45/72 (62.50%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 190 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 GPP +V+E+ F+H CEG+ V + TN KIPYFNAPIYL+NK+QIGK+DE+FGP+N+ YF+VK EGIV++S+ Sbjct: 25 GPPDQVIELGLFMHDCEGEMVCQSTNVKIPYFNAPIYLENKSQIGKIDEVFGPMNQVYFTVKPSEGIVSSSF 96
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_CHAGB (H/ACA ribonucleoprotein complex subunit 1 OS=Chaetomium globosum GN=GAR1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.607e-23 Identity = 45/72 (62.50%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 190 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 GPPA V+E+ F+HACEG+ V + TN K+P+FNAPIYL+NKT +GKVDE+ GPIN+ YF++K EGI ATS+ Sbjct: 32 GPPATVLEMGKFIHACEGEMVIESTNPKVPHFNAPIYLENKTAVGKVDEVLGPINQVYFTIKPSEGIQATSF 103
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_YEAST (H/ACA ribonucleoprotein complex subunit 1 OS=Saccharomyces cerevisiae GN=GAR1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.468e-22 Identity = 45/73 (61.64%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 187 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 +GPP V+E+ +FLH CEGD V + N KIPYFNAPIYL+NKTQ+GKVDEI GP+NE +F++K +G+ ATS+ Sbjct: 31 QGPPDTVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFTIKCGDGVQATSF 103
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_KLULA (H/ACA ribonucleoprotein complex subunit 1 OS=Kluyveromyces lactis GN=GAR1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.504e-22 Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 187 EGPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 +GPP V+E+ +FLH CEGD V + N KIPYFNAPIYL+NKTQ+GKVDEI GP+NE +F+VK +G+ A S+ Sbjct: 29 QGPPDSVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFFTVKCSDGVKAESF 101
BLAST of CX287383 vs. ExPASy Swiss-Prot
Match: GAR1_BOTFB (H/ACA ribonucleoprotein complex subunit 1 OS=Botryotinia fuckeliana (strain B05.10) GN=GAR1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.272e-22 Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 190 GPPAEVVEVSSFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYFSVKMMEGIVATSY 405 GPPA+V + SFLHA EG+ V + N KIPYFNAPIYL+NKT IGKVDEI GPIN+ YF++K EGI ATS+ Sbjct: 42 GPPADVFAMGSFLHASEGEIVCESINTKIPYFNAPIYLENKTSIGKVDEILGPINQVYFTIKPTEGIQATSF 113 The following BLAST results are available for this feature:
BLAST of CX287383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287383 ID=CX287383; Name=CX287383; organism=Citrus clementina; type=EST; length=405bpback to top |