CX288497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.397e-56 Identity = 106/138 (76.81%), Postives = 120/138 (86.96%), Query Frame = 2 Query: 2 KNSLATS-SKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN++A+S SKN DEVDGK G L VKVSMDGAPYLRKVDL+ Y+ YQ+LSSALEKMFSCFT+GQ G HGA GRE +SE KLKDLLHGSEFVLTYEDKDGDWMLVGDVPWE+F TC++L+IMK +D+IGLAP AVEK Sbjct: 177 KNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEK 314
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 3.756e-55 Identity = 104/139 (74.82%), Postives = 123/139 (88.49%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL--APRAVEK 412 KN+LAT+ KN+DEVDG+ GS AL VKVSMDGAPYLRKVDL++Y+ Y ELSSALEKMF+ FT+GQ GS+GA G++MLSE+KLKDLL+G ++VLTYEDKDGDWMLVGDVPWEMFI CK+L+IMK DAIGL APRA+EK Sbjct: 195 KNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEK 333
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.633e-50 Identity = 100/147 (68.03%), Postives = 118/147 (80.27%), Query Frame = 2 Query: 2 KNSLATSSK----NN---DEVDGKAGSS--ALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 415 KNS+A+S NN +E + K+G L VKVSM+GAPYLRK+DLK Y Y ELSSALEKMFSCFTIGQ+GSHG GR+ L+ES+L DLL GSE+V+TYEDKD DWMLVGDVPWEMFI +CK+LRIMKS++AIGLAPR +EKC Sbjct: 155 KNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKC 301
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.162e-46 Identity = 98/145 (67.59%), Postives = 112/145 (77.24%), Query Frame = 2 Query: 2 KNSLATSS-KNNDEVDG---KAGS---SALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 415 KN LA + K D DG K+G+ +A VKVSMDGAPYLRKVDLK Y Y ELS ALEKMFS FTIG GSHG G ++ESK+ DLL+GSE+V TYEDKDGDWMLVGDVPWEMF+ +CKRLRIMK ++AIGLAPRA+EKC Sbjct: 132 KNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG---MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKC 273
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.749e-44 Identity = 87/146 (59.59%), Postives = 112/146 (76.71%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSA--------LLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 415 K + +++ ND+ G +G+++ VKVSMDGAPYLRK+DLK Y YQ+LS+AL KMFS FTIG YG G ++ ++ESKL DLL+GS++V TYEDKDGDWMLVGDVPWEMF+ +CKR+RIMK ++AIGLAPRA+EKC Sbjct: 89 KPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKC 232
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.298e-43 Identity = 88/142 (61.97%), Postives = 105/142 (73.94%), Query Frame = 2 Query: 2 KNSLATSS-----KNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN++A S K++ E S L VKVSMDGAPYLRKVDLK Y Y+ELS ALEKMFSCFT+G S+G GR+ LS+ +L DL +G+E VLTYEDKD DWMLVGDVPW MF +C+RLRIMK +DA+GLAPRA +K Sbjct: 120 KNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDK 261
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.792e-42 Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 2 Query: 14 ATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 A+S K + G AG+ LVKVSMDGAPYLRKVDLK Y YQ+LS AL KMFS FT+G YG+ G + + ++ESKL +LL+ SE+V +YEDKDGDWMLVGDVPWEMF+ +CKRLRIMK ++A+GLAPRA+EK Sbjct: 109 ASSEKAGNFGGGAAGAG--LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEK 237
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.386e-41 Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 2 Query: 2 KNSLATSSKNN-DEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN +A +E G + VKVSMDGAPYLRKVDLK Y+ Y++LS AL KMFS FT+G YG+ G + + ++ESK+ DLL+ SE+V +YEDKDGDWMLVGDVPW MF+ +CKRLRIMK ++AIGLAPRA+EK Sbjct: 88 KNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEK 223
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.173e-40 Identity = 85/140 (60.71%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 2 KNSLATSSKNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAI--GLAPRAVEKC 415 KN LA +E + + +A VKVSMDGAPYLRKVDLK Y Y+ELS +L KMFS FT G S G ++ ++ESKL DLL+ S++V TYEDKDGDWMLVGDVPWEMF+ +CKRLRIMK +AI GLAPRA+ KC Sbjct: 102 KNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKC 239
BLAST of CX288497 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.773e-39 Identity = 78/138 (56.52%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 2 KNSLATSS-KNNDEVDGKAGSSALLVKVSMDGAPYLRKVDLKNYSKYQELSSALEKMFSCFTIGQYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 412 KN+LA S+ K E GK+ VKVSMDGAPYLRKVDLK YS Y++LS ALEKMFSCF G+ SH R+ L++ D L E+VLTYEDKD DWMLVGD+PW++F +C++LRIM+ +DA G+APR++E+ Sbjct: 139 KNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQ 276 The following BLAST results are available for this feature:
BLAST of CX288497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288497 ID=CX288497; Name=CX288497; organism=Citrus clementina; type=EST; length=575bpback to top |