CX288724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3) HSP 1 Score: 279.256 bits (713), Expect = 8.592e-75 Identity = 136/163 (83.44%), Postives = 152/163 (93.25%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 489 GKL RDFKHLNLDF L+ D ETGK+KLKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG + K+IEIRNFLGEKKVRKV+MLDGVT++RS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEKS I+ EE Sbjct: 32 GKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 9.500e-74 Identity = 139/163 (85.28%), Postives = 151/163 (92.64%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 489 GKL RDFKHLNLDF L+TDE GK+KLKIDAWFGSRKTSAAIRTALSHV NLITGVTKG+RYKMRFVYA FPINASI N+NK+IEIRNFLGEKKVRKVD+LDGV++IRS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEK ++ EE Sbjct: 32 GKLVRDFKHLNLDFDLITDEN-GKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 6.808e-72 Identity = 131/163 (80.37%), Postives = 148/163 (90.80%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 489 GKL+RDFKHLNLDF L+ D+ TGKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI NNK+IEIRNFLGEKKVRKV+MLDGV ++RS+KVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEK I EE Sbjct: 32 GKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3) HSP 1 Score: 266.929 bits (681), Expect = 4.413e-71 Identity = 133/159 (83.65%), Postives = 147/159 (92.45%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 477 GKL+R+FKHLNLDF L+ G RKL++DAWFG+R+T AAIRTA+SHV NLITGVTKGYRYKMRFVYAHFPINASI N+N AIEIRNFLGEKKVRKVDML+GVT++RS+KVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS+K TI Sbjct: 32 GKLTRNFKHLNLDFQLLE----GGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTI 186
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.058e-48 Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTIL 480 G L R FKHL LD ++ KR LK++ WFG++K AA+RT SH+ N+I GVT G++YKMR VYAHFPIN NN IEIRNFLGEK +R+V+M GVTV+ S KDEL+++GNDIE VS SAALI Q VKNKDIRKFLDG+YVSEK+T++ Sbjct: 32 GTLKRSFKHLALDMYM-----PDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.169e-47 Identity = 96/163 (58.90%), Postives = 118/163 (72.39%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 489 G L R+FKHL +D ++ R LK++ WFGS+K AA+RT SHV N+I GVTKG++YKMR VYAHFPIN N IEIRNFLGEK +R+V M GVTV+ S K KDEL+++GN +E VS SAALI Q VKNKDIRKFLDG+YVSEK+T+ +E Sbjct: 32 GVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVEVDE 189
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.402e-47 Identity = 96/159 (60.38%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 477 G L RDF H+N++ L+ + K++L++D W+G+RK A IRT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 32 GTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.444e-47 Identity = 95/159 (59.75%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 477 G L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 32 GTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 4.444e-47 Identity = 95/159 (59.75%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 477 G L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 32 GTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX288724 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.444e-47 Identity = 95/159 (59.75%), Postives = 115/159 (72.33%), Query Frame = 1 Query: 1 GKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 477 G L RDF H+N++ L+ + K++L++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 32 GTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187 The following BLAST results are available for this feature:
BLAST of CX288724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288724 ID=CX288724; Name=CX288724; organism=Citrus clementina; type=EST; length=547bpback to top |