CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH5_ORYSJ (DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica GN=Os07g0301200 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.266e-31 Identity = 60/76 (78.95%), Postives = 70/76 (92.11%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E ML+R GW ++HG KAQH+RTK+LSLFKEG+CPLM+ATDVA+RGLDIPDVEVVINYS+PLTTEDYVHRIGRT Sbjct: 358 VETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRT 433
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH5_ARATH (DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana GN=RH5 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.594e-31 Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LE L++ GWK +IHG KAQ ERT+SLSLFKEG+CPL+VATDVAARGLDIPDVEVVINY+FPLTTEDYVHRIGRT Sbjct: 382 LERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRT 457
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_PICGU (ATP-dependent RNA helicase DBP3 OS=Pichia guilliermondii GN=DBP3 PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.632e-23 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E MLRRSG+ VAAIHG +Q +RT +L FK G L++ATDVAARGLDIP+V+VVIN +FPLT EDYVHRIGRT Sbjct: 386 VEAMLRRSGFNVAAIHGDLSQQQRTSALDSFKRGDSNLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRT 461
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_USTMA (ATP-dependent RNA helicase DBP3 OS=Ustilago maydis GN=DBP3 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.127e-22 Identity = 51/76 (67.11%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E LRR G+KV+ IHG Q+ER SL FK PL+VATDVAARGLDIP+VE V+NY+FPLT EDYVHRIGRT Sbjct: 436 IEQTLRRGGFKVSGIHGDLGQNERIASLERFKSAETPLLVATDVAARGLDIPNVEHVVNYTFPLTIEDYVHRIGRT 511
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_PHANO (ATP-dependent RNA helicase DBP3 OS=Phaeosphaeria nodorum GN=DBP3 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.512e-22 Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +EN +R G++V IHG +Q +R+ SL+ FKEG PL+VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 444 IENFIRMKGFRVGGIHGDLSQEKRSASLAAFKEGQVPLLVATDVAARGLDIPAVKLVINVTFPLTAEDYVHRIGRT 519
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_PICST (ATP-dependent RNA helicase DBP3 OS=Pichia stipitis GN=DBP3 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.280e-22 Identity = 49/76 (64.47%), Postives = 63/76 (82.89%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +LRR+ + VAAIHG +Q +RT +L+ FK+G L++ATDVAARGLDIP+V+VVIN +FPLT EDYVHRIGRT Sbjct: 378 IEGLLRRNSYNVAAIHGDLSQQQRTNALNSFKKGESSLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRT 453
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_BOTFB (ATP-dependent RNA helicase dbp3 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp3 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.280e-22 Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E+ +R+ G++VA IHG +Q +RT+SL FK G P++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 444 VESFIRQKGFRVAGIHGDLSQEQRTRSLEAFKSGNTPVLVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRT 519
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_SCLS1 (ATP-dependent RNA helicase dbp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp3 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 4.284e-22 Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +R+ G++VA IHG +Q +RT+SL FK G P++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 448 VEGFIRQKGFRVAGIHGDLSQEQRTRSLEAFKSGNTPVLVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRT 523
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_GIBZE (ATP-dependent RNA helicase DBP3 OS=Gibberella zeae GN=DBP3 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.284e-22 Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +EN L R G +V IHG Q +RT+SL FK G P++VATDVAARGLDIP+V++VIN +FPLT EDYVHRIGRT Sbjct: 433 IENFLSRKGIRVGGIHGDLRQEQRTRSLEAFKSGQTPVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRT 508
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_ASPCL (ATP-dependent RNA helicase dbp3 OS=Aspergillus clavatus GN=dbp3 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.284e-22 Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +LR +KVA IHG QHER KSL FK G ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 354 VERLLRNKNFKVAGIHGDLNQHERFKSLDAFKSGAATVLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRT 429 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |