CX288916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288916 vs. ExPASy Swiss-Prot
Match: VATG_CITLI (V-type proton ATPase subunit G OS=Citrus limon GN=VATG PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 6.546e-34 Identity = 80/110 (72.73%), Postives = 81/110 (73.64%), Query Frame = -1 Query: 237 MASNRGHGGIXXXXXXXXXXQHIVAAARNAKMARLXXXXXXXXXXXXXXXAQVEREFQRKLSESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 566 M SNRG GGI QHIVAAARNAKMARL AQVEREFQRKL+ES GDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQM LKHVTTVKN Sbjct: 1 MTSNRGQGGIQQLLAAEQEAQHIVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110
BLAST of CX288916 vs. ExPASy Swiss-Prot
Match: VAGT1_ARATH (V-type proton ATPase subunit G1 OS=Arabidopsis thaliana GN=VHA-G1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.141e-24 Identity = 64/110 (58.18%), Postives = 70/110 (63.64%), Query Frame = -1 Query: 237 MASNRGHGGIXXXXXXXXXXQHIVAAARNAKMARLXXXXXXXXXXXXXXXAQVEREFQRKLSESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 566 M SNRG G I QHIV AAR AKMARL AQ E++FQRKL E+SGDSGANVKRLEQET+ KI LK A +I DVV+MLLKHVTTVKN Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110
BLAST of CX288916 vs. ExPASy Swiss-Prot
Match: VATG1_TOBAC (V-type proton ATPase subunit G 1 OS=Nicotiana tabacum GN=VATG1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.158e-22 Identity = 61/110 (55.45%), Postives = 69/110 (62.73%), Query Frame = -1 Query: 237 MASNRGHGGIXXXXXXXXXXQHIVAAARNAKMARLXXXXXXXXXXXXXXXAQVEREFQRKLSESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 566 MAS+ G GI QHIV AR AK ARL A +E EFQRKL ++SGDSGANVKRLEQET+ KI HLK AE++ DVVQMLL+HVTTVKN Sbjct: 1 MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110
BLAST of CX288916 vs. ExPASy Swiss-Prot
Match: VATG2_TOBAC (V-type proton ATPase subunit G 2 OS=Nicotiana tabacum GN=VATG2 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.380e-20 Identity = 59/111 (53.15%), Postives = 66/111 (59.46%), Query Frame = -1 Query: 237 MASNRG-HGGIXXXXXXXXXXQHIVAAARNAKMARLXXXXXXXXXXXXXXXAQVEREFQRKLSESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 566 M SNRG GI QHIV AAR K AR+ A +E EFQR + ++SGDSGANVKRLEQET KI HLK AE I +DVVQMLL+ VTTVKN Sbjct: 1 MESNRGSQNGIQLLLGAEQEAQHIVNAARTGKQARMKQAKEEAEKEIAEFRAYMEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111
BLAST of CX288916 vs. ExPASy Swiss-Prot
Match: VATG2_ARATH (V-type proton ATPase subunit G2 OS=Arabidopsis thaliana GN=VHA-G2 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.763e-16 Identity = 49/88 (55.68%), Postives = 54/88 (61.36%), Query Frame = -1 Query: 237 IVAAARNAKMARLXXXXXXXXXXXXXXXAQVEREFQRKLSESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 500 IV AAR AKM RL E+ FQRKL +SGDSGANVKRLEQET+ KI LK A +I DVV MLLK+VTTV N Sbjct: 19 IVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106
BLAST of CX288916 vs. ExPASy Swiss-Prot
Match: VATG3_ARATH (V-type proton ATPase subunit G3 OS=Arabidopsis thaliana GN=VHA-G3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.676e-11 Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 246 MASNRGHGGIXXXXXXXXXXQHIVAAARNAKMARLXXXXXXXXXXXXXXXAQVEREFQRKLSESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTT 566 M S RG GGI IV+AAR AK+AR+ +++E E+Q ++S + D A+ KRL+ ET+V+I +LK + K+ D+V+ML+K+VTT Sbjct: 1 MDSLRGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQVSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105 The following BLAST results are available for this feature:
BLAST of CX288916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288916 ID=CX288916; Name=CX288916; organism=Citrus clementina; type=EST; length=587bpback to top |