CX288930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288930 vs. ExPASy Swiss-Prot
Match: SMT2_ARATH (24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 4.907e-49 Identity = 87/111 (78.38%), Postives = 100/111 (90.09%), Query Frame = 1 Query: 1 ERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKPHPPKSS 333 ERGDALPGLR+Y +I E AK+VGFE+VKEKDLA PPA+PWWTRLKMGR AYWRNHI+V IL+A+G+APKGTV VH+MLFKTADYLTRGGETGIF+PMHM+L RKP P+ S Sbjct: 250 ERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAYWRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGETGIFSPMHMILCRKPESPEES 360
BLAST of CX288930 vs. ExPASy Swiss-Prot
Match: SMT3B_ARATH (24-methylenesterol C-methyltransferase 3 OS=Arabidopsis thaliana GN=SMT3 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.516e-47 Identity = 85/105 (80.95%), Postives = 96/105 (91.43%), Query Frame = 1 Query: 1 ERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 315 ERGDALPGLRSYA+I AK+VGFEVVKEKDLAKPP++PWW RLKMGR AYWRNH++V IL+A+G+APKGTV VH MLFKTADYLTRGGETGIF+PMHM+L RKP Sbjct: 250 ERGDALPGLRSYADIAVTAKKVGFEVVKEKDLAKPPSKPWWNRLKMGRIAYWRNHVVVVILSAIGVAPKGTVDVHKMLFKTADYLTRGGETGIFSPMHMILCRKP 354
BLAST of CX288930 vs. ExPASy Swiss-Prot
Match: SMT2_ORYSJ (24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Smt2-1 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 5.438e-40 Identity = 78/105 (74.29%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 1 ERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 315 ERGDALPGLR EI IAK VGFEV+KE DLA PPA PWWTRLKMGR AYWRN ++V +L L IAPKG VH+ML++TA +LTRGGETGIFTPMHMVLLRKP Sbjct: 255 ERGDALPGLRRQDEIASIAKEVGFEVLKELDLALPPALPWWTRLKMGRIAYWRNSLVVRVLTMLRIAPKGVCEVHEMLYETAQHLTRGGETGIFTPMHMVLLRKP 359
BLAST of CX288930 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.322e-13 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 1 ERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHI----------LVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 315 E G+ LP +RS + + AK GFEV+ +KDLA+ PW+ L RF+ + +V L +G+AP+G+ V + L K A+ L GG+ IFTPM+ L+RKP Sbjct: 227 ELGNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFRLTTVGRAITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKP 341
BLAST of CX288930 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.673e-12 Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 1 ERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHI----------LVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 315 E GD LP +R + E K+ GFEV+ EKDLAK PW+ L F+ + +V IL + +AP+G+ V + L + A+ L GG IFTPM+ L RKP Sbjct: 221 EIGDGLPDIRLTTKCLEALKQAGFEVIWEKDLAKDSPVPWYLPLDKNHFSLSSFRLTAVGRFITKNMVKILEYIRLAPQGSQRVSNFLEQAAEGLVDGGRREIFTPMYFFLARKP 335 The following BLAST results are available for this feature:
BLAST of CX288930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288930 ID=CX288930; Name=CX288930; organism=Citrus clementina; type=EST; length=630bpback to top |