CX290934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO1_MOUSE (Mitochondrial Rho GTPase 1 OS=Mus musculus GN=Rhot1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.533e-39 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 1 Query: 7 TSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RIF I D D DG LNDAELN FQ CFN PL P + VK V++ DGV D GLTL GFLFLH LF Sbjct: 139 SSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHLSDGVADSGLTLRGFLFLHTLF 271
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO1_HUMAN (Mitochondrial Rho GTPase 1 OS=Homo sapiens GN=RHOT1 PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 8.533e-39 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 1 Query: 7 TSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RIF I D D DG LNDAELN FQ CFN PL P + VK V++ DGV D GLTL GFLFLH LF Sbjct: 126 SSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHISDGVADSGLTLKGFLFLHTLF 258
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO1_DANRE (Mitochondrial Rho GTPase 1-A OS=Danio rerio GN=rhot1a PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.456e-38 Identity = 77/134 (57.46%), Postives = 95/134 (70.90%), Query Frame = 1 Query: 7 TSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RIF I D D DG LND ELN FQ CFN PL P + VK V++ DGV D GLTL GFLFLH LF Sbjct: 126 SSMETIL-PIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYSPEEKEMKPSCIKALTRIFKISDLDNDGILNDNELNFFQRTCFNIPLAPQALEDVKNVVRKNMTDGVKDNGLTLKGFLFLHTLF 258
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO1_BOVIN (Mitochondrial Rho GTPase 1 OS=Bos taurus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.456e-38 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 1 Query: 7 TSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 +S+E ++ PIM Q+ EIETCVECSA + + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RIF I D D DG LNDAELN FQ CFN PL P + VK V++ DGV D GLTL GFLFLH LF Sbjct: 139 SSMETIL-PIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHISDGVADGGLTLKGFLFLHTLF 271
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO1_CHICK (Mitochondrial Rho GTPase 1 OS=Gallus gallus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.243e-38 Identity = 78/134 (58.21%), Postives = 95/134 (70.90%), Query Frame = 1 Query: 7 TSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 +S+E ++ PIM Q+ EIETCVECSA + ++FYYAQKAVLHPT PL+ +E+ +KP C++AL RIF I D D DG LNDAELN FQ CFN PL P + VK V++ DGV D GLTL GFLFLH LF Sbjct: 126 SSMETIL-PIMNQYTEIETCVECSAKNLKNRSELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFRISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKNVSDGVADNGLTLKGFLFLHTLF 258
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO2_DANRE (Mitochondrial Rho GTPase 2 OS=Danio rerio GN=rhot2 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.609e-37 Identity = 78/136 (57.35%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 1 NATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 + +S+E ++ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D +++ LK +CVRAL RIF I D D D L+DAELN FQ CF PL P + VK V + DGV D GLTL+GFLFL+ LF Sbjct: 124 SGSSMETIL-PIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEDKQLKAQCVRALSRIFSISDQDNDHILSDAELNCFQKLCFGNPLAPQALEDVKTVVWKNTSDGVQDNGLTLNGFLFLNTLF 258
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO2_XENTR (Mitochondrial Rho GTPase 2 OS=Xenopus tropicalis GN=rhot2 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.043e-36 Identity = 75/134 (55.97%), Postives = 96/134 (71.64%), Query Frame = 1 Query: 7 TSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 +S+E ++ PIM QF EIETCVECSA + + +VFYYAQKAVLHPTAPL+D +E+ L+P+C +AL RIF I + D + L+D ELN FQ CF PL P + VK V++ DGV D GLTL+GFLFL+ LF Sbjct: 126 SSMESIL-PIMNQFSEIETCVECSAKNLKNISEVFYYAQKAVLHPTAPLYDPEEKQLRPQCKKALTRIFTISEQDNNQILSDEELNFFQQSCFGNPLAPQALEDVKMVVKKNTADGVRDNGLTLNGFLFLNTLF 258
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO2_CHICK (Mitochondrial Rho GTPase 2 OS=Gallus gallus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.035e-36 Identity = 75/130 (57.69%), Postives = 91/130 (70.00%), Query Frame = 1 Query: 19 EVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 EV+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D +E+ L+P C RAL RIF + D D + L+D ELN FQ CF PL P + VK V + DGV D GLTL+GFLFL+ LF Sbjct: 129 EVILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEEKQLRPACSRALTRIFNLSDQDNNQILSDDELNYFQKSCFGNPLAPQALEDVKMVVWKNTTDGVQDNGLTLNGFLFLNTLF 258
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO2_BOVIN (Mitochondrial Rho GTPase 2 OS=Bos taurus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.967e-35 Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 10 SLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C +AL RIF + D DMD AL+D ELN FQ CF PL P + VK V + GV D LTL GFLFL+ LF Sbjct: 127 SMEAVL-PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDMDQALSDQELNAFQTSCFGHPLAPQALEDVKMVVSKNVVGGVRDDQLTLDGFLFLNTLF 258
BLAST of CX290934 vs. ExPASy Swiss-Prot
Match: MIRO2_PIG (Mitochondrial Rho GTPase 2 OS=Sus scrofa GN=RHOT2 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.724e-35 Identity = 75/133 (56.39%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 10 SLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTAPLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVSVKRFVQEKQHDGVNDLGLTLSGFLFLHALF 408 S+E V+ PIM QF EIETCVECSA + + ++FYYAQKAVLHPTAPL+D + + L+P C +AL RIF + D DMD AL+D ELN FQ CF PL P + VK V GV D LTL GFLFL+ LF Sbjct: 127 SMEAVL-PIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDMDQALSDQELNAFQTCCFGHPLAPQALEDVKLVVSRNVAGGVQDDRLTLDGFLFLNTLF 258 The following BLAST results are available for this feature:
BLAST of CX290934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290934 ID=CX290934; Name=CX290934; organism=Citrus clementina; type=EST; length=410bpback to top |