CX291040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 7.832e-53 Identity = 95/144 (65.97%), Postives = 122/144 (84.72%), Query Frame = -3 Query: 142 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIK 573 LKGETE+IGKL E+T+MRK+G + +N+HF+SFNTICDATQERQDAM+K+VE +DL++V+GG+NSSNT+HLQEI+ +R IPSY IDS RIGPGN++ +K +H L KENWLP G I +GITSGASTPDK V +VL+K+F +K Sbjct: 254 LKGETEQIGKLFERTLMRKYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLDLMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPEGPIVVGITSGASTPDKVVSDVLEKIFALK 397
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 2.976e-52 Identity = 92/148 (62.16%), Postives = 124/148 (83.78%), Query Frame = -3 Query: 130 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEA 573 LKGETE+IGKL E+T+MRK+G VNEHF+SFNTICDATQERQDA++++V+E +DL++V+GG+NSSNT+HLQEI+ D+ IPSY IDS RIGPGN++ +K ++ +L +NWLPNG + IG+TSGASTPDK V ++++K+F IK A Sbjct: 262 LKGETEQIGKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.659e-52 Identity = 96/144 (66.67%), Postives = 120/144 (83.33%), Query Frame = -3 Query: 142 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIK 573 LKGETE+IGKL E+TM++K+G + +NEHF+SFNTICDATQERQDAM +V+E +DL++V+GG+NSSNT+HLQEIA + GIPSY IDS RIGPGN+I +K +H ENWLP+ ITIGITSGASTPDK VEEVL K+F ++ Sbjct: 253 LKGETEQIGKLFERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDLMVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDRPITIGITSGASTPDKVVEEVLNKIFALR 396
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.633e-50 Identity = 90/145 (62.07%), Postives = 125/145 (86.21%), Query Frame = -3 Query: 139 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKR 573 LK ETE IGKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VE+V++++F+++R Sbjct: 253 LKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.633e-50 Identity = 90/145 (62.07%), Postives = 125/145 (86.21%), Query Frame = -3 Query: 139 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKR 573 LK ETE IGKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VE+V++++F+++R Sbjct: 253 LKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.633e-50 Identity = 93/149 (62.42%), Postives = 123/149 (82.55%), Query Frame = -3 Query: 127 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 573 LK ETE+IGKL E TM++K+G +NEHF+SFNTICDATQERQDAM +VEE+VD+++V+GG+NSSNT+HLQEI+ ++GI SY IDS+KRI PGNKI +K + ++ KENWLP+G+I +G+TSGASTPDK VE V++++FE K L Sbjct: 253 LKSETEQIGKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDVMVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDGKIIVGVTSGASTPDKVVEAVIERIFEEKNAGVL 401
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.405e-48 Identity = 88/149 (59.06%), Postives = 122/149 (81.88%), Query Frame = -3 Query: 127 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 573 LKGETE+IGKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VE+V++K+F +K A+ Sbjct: 253 LKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 4.447e-48 Identity = 91/147 (61.90%), Postives = 117/147 (79.59%), Query Frame = -3 Query: 133 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREE 573 LK ETE IGKL EKT+++K+G +N HF+SFNTICDATQERQDAM+ +VEE + L++V+GG+NSSNT+HLQEIA + GIPS IDS RIGPGN++ +K + +L E WLP G+IT+G+TSGASTPDK VEEV+KK+ IK + Sbjct: 226 LKSETEMIGKLFEKTLLQKYGPIELNNHFMSFNTICDATQERQDAMFDLVEEDLSLMVVIGGFNSSNTTHLQEIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAGKITVGVTSGASTPDKVVEEVMKKILAIKEAQ 372
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.447e-48 Identity = 88/149 (59.06%), Postives = 122/149 (81.88%), Query Frame = -3 Query: 127 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIKREEAL 573 LKGETE+IGKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VE+V++K+F +K A+ Sbjct: 253 LKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401
BLAST of CX291040 vs. ExPASy Swiss-Prot
Match: ISPH_MICAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=ispH PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.207e-47 Identity = 88/144 (61.11%), Postives = 118/144 (81.94%), Query Frame = -3 Query: 142 LKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPNGQITIGITSGASTPDKAVEEVLKKVFEIK 573 LK ETEEIGKL E TM+RK+G + +HF+SFNTICDATQERQDA++++V+E + L++V+GG+NSSNT+HLQEIA +R IPSY IDS +RI PGN+I +K + +L+ +NWL G+I +G+TSGASTPDK VEEV++K+F K Sbjct: 253 LKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDAIFELVKEPLSLMVVIGGYNSSNTTHLQEIAIERAIPSYHIDSAERILPGNRIEHKPLGDDLIITDNWLNEGKIVVGVTSGASTPDKVVEEVIEKIFAFK 396 The following BLAST results are available for this feature:
BLAST of CX291040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291040 ID=CX291040; Name=CX291040; organism=Citrus clementina; type=EST; length=575bpback to top |