CX291110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291110 vs. ExPASy Swiss-Prot
Match: SIZ1_ARATH (E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 5.076e-52 Identity = 111/186 (59.68%), Postives = 134/186 (72.04%), Query Frame = 1 Query: 1 RSESDRREIGDLASWHFPDGSLCAPAGGEDKPKVEMLKHVRQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEKFENHDLKVIPMSSSATGSGRDGEDASVNQDVGGTFDFTNTGIEHDSMSLNVDPTYAFTDRNPCAPVGNTEVIVLSDSEDENDLFISSENIYRDNRNDVGGVSF 558 + ES+RRE+G+L+ WH PDGSLC P+ + K K+EML V+QEG S+G LKLGIRKNRNG+WEVSKP + NG S S QEK + +IPMSSSATGSGRDG+DASVNQD GTFDF G+E DS+S+NVD Y F DRN GN EVIVLSDS+DENDL I+ Y + D GG++F Sbjct: 450 KRESERRELGELSQWHAPDGSLC-PSAVDIKRKMEMLP-VKQEGYSDGPAPLKLGIRKNRNGIWEVSKP-NTNGLSSSNRQEKVGYQEKNIIPMSSSATGSGRDGDDASVNQDAIGTFDFVANGMELDSISMNVDSGYNFPDRNQSGEGGNNEVIVLSDSDDENDLVITPGPAYSGCQTD-GGLTF 631
BLAST of CX291110 vs. ExPASy Swiss-Prot
Match: SIZ1_ORYSJ (E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.625e-24 Identity = 75/182 (41.21%), Postives = 97/182 (53.30%), Query Frame = 1 Query: 31 DLASWHFPDGSLCAPAGGED-KPKVEMLKHVRQEGVSEGHIGLKLGIRKNRNGLWEVSKPEDMNGSS--GSRLQEKFENHDL-KVIPMSSSATGSGRDGEDASVNQDVGGTFDFT--NTGIEHDSMSLNVDPTYAFTDRNPCAPVGNTEVIVLSDSEDENDLFISSENIYRDNRNDVGGVSF 558 +L+ WH PDG+LC P ED KP ++ EG S+G LK+GI++N NG+WEVS D S G+R+Q L ++ MS+S T S RDGED SVNQ+ D + N E DS SLN TD P T+VIVLSDS++END + +Y DN G F Sbjct: 456 ELSQWHMPDGTLCNPK--EDVKPAMQNGNEQMMEGTSDGQKSLKIGIKRNPNGIWEVSSKADDKKPSVVGNRMQNNSGFRALNNIMHMSNSPTSSYRDGEDPSVNQESNRHVDLSLNNGNNEFDSFSLNFGQA-CNTDDRPQQQHNATDVIVLSDSDEENDAMVCPPAVY-DNTTTANGSGF 633
BLAST of CX291110 vs. ExPASy Swiss-Prot
Match: SIZ2_ORYSJ (E3 SUMO-protein ligase SIZ2 OS=Oryza sativa subsp. japonica GN=SIZ2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 59/177 (33.33%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 22 EIGDLASWHFPDGSLCAPAGGEDKPKVEMLK-HVRQEGVSEGHIG-LKLGIRKNRNGLWEVSKPEDMNGSSGSRLQEKFENHDLKVIPMSSSATGSGRDGEDASVNQDVGGTFDFTNTGIEHDSMSLNVDPTYAFTDRNPCAPVGNTEVIVLSDSEDENDLFISSENIYRDNRNDVG 546 E+ LA WH PDG+LC P KP + ++K +++E +SE G LKLGIR+N NG WE++K D N +++ EN V+ S++ + ++G + G FD + I +D S +D + P AP +VIVLSDS+D+N + +S ++ + +D G Sbjct: 463 ELKGLAQWHLPDGTLCMPTDTRSKPNIRIVKQEIKEEPLSEETGGRLKLGIRRNNNGQWEINKRLDSNNGQNGYIED--EN---CVVSASNTDDENSKNG----IYNPEPGQFDQLTSNI-YDLDSSPMDAHF------PPAPT-EQDVIVLSDSDDDNVMVLSPGDVNFSSAHDNG 622 The following BLAST results are available for this feature:
BLAST of CX291110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291110 ID=CX291110; Name=CX291110; organism=Citrus clementina; type=EST; length=575bpback to top |