CX291474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: LEUNG_ARATH (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2) HSP 1 Score: 242.662 bits (618), Expect = 1.619e-63 Identity = 124/241 (51.45%), Postives = 160/241 (66.39%), Query Frame = 3 Query: 24 RKRKGP-SSSGAANSGCTGNTVGXXXXXXXXXXXXXXXGDAVAMSGSMQHVSNVPKGLMMYGSDGTGGHASSTNQLDDMEHFGDIGSLDDNVESFLSQDDGDGRDLFGSLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKDDLFCSC 743 RKRK P SSSG ANS T NT G GD ++M ++ H K +MM+G++GTG S +NQL DM+ F + GSLDDNVESFLSQ+DGD RD + + SK F+F EV+S+R S++KVTCCHFSSDGK+LASAGHDKK V+W + + + T ++H +ITD+RF P+ +LATSSFDKTVR+WDA + L+T+ GH++ V SLDFHP KDDL CSC Sbjct: 524 RKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMP-NLPHSGGSSKSMMMFGTEGTGTLTSPSNQLADMDRFVEDGSLDDNVESFLSQEDGDQRDAV--------TRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSC 755
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: YY46_ANASP (Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 3 Query: 429 SSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 +S V F+ DG LAS D+ V +W + + + CT H + V F P+ + LA+ S DKTVR+WD + CL T+ GH N V S+ F+P Sbjct: 1200 TSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSK-CLHTFQGHTNWVNSVAFNP 1294 HSP 2 Score: 68.1662 bits (165), Expect = 5.465e-11 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 387 KAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFH 713 +A + E+ + + +S V FS DGK+LAS D+ V +W++ + Q T H + V F PNS LA+ S D+TVR+WD + CL + GH V S+ F+ Sbjct: 892 EAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGE-CLYIFQGHTGWVYSVAFN 999 HSP 3 Score: 68.1662 bits (165), Expect = 5.465e-11 Identity = 38/124 (30.65%), Postives = 64/124 (51.61%), Query Frame = 3 Query: 345 SLKRNPSEQATETSKAFSFNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 +L S+Q + S + + + +S V F+ DG +LAS DK V +W++ + + T H + + V F P+ + LA+ S D+TVR+W+ + CL T+ GH + V S+ F P Sbjct: 1214 TLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSK-CLHTFQGHTSWVSSVTFSP 1336
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.456e-12 Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 420 RKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKDDLFCS 740 R S+ V FS DG++LAS G D+ V +W++ + T H H + V F P+ LA++S DKT+++WD + CLQT TGH + V + F P + L S Sbjct: 681 RGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWD-IQDGTCLQTLTGHTDWVRCVAFSPDGNTLASS 786 HSP 2 Score: 68.1662 bits (165), Expect = 5.465e-11 Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 363 SEQATETSKAFSFNEVSSIRKSSSK---VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHPKKDDLFC 737 S A T K + ++ +R S V FS+DG+ LAS D+ + +WN + T H + + + + P+S L + S D+T+++WD + + C++T GH N V S+ F P L C Sbjct: 785 SSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWD-CQTHICIKTLHGHTNEVCSVAFSPDGQTLAC 911
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11 Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 399 FNEVSSIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 F+E ++ VTC S + + +A++ D + +W+ F+ ECT H I+ V++ S LA++S DKT+RIWD K ++ GH N+V S+DF+P Sbjct: 44 FSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEK-RCSVRCLKGHTNYVSSIDFNP 148
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 39/121 (32.23%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 345 SLKRNPSEQATETSKAFSFNEVS-SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSL 704 SL + SE AT F E +++ ++ V F G LLAS D + +W+ + + T H+H ++ VRF P+ QL +SS DKT+++W+AA +C++T GH + V + Sbjct: 119 SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA-TGYCIKTLVGHEDWVRKI 238
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 3 Query: 414 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 S+ + + V C FS DG+L+ SA DK V +W+ + + + +H +T V F P+ T +A + D TV++WD A+ + LQ Y H+ V +L FHP Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-ARTHRLLQHYQLHSAAVNALSFHP 239
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.138e-11 Identity = 33/93 (35.48%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 438 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 V+ FS +G+ LAS+ D+ +++W + + E T HN I+DV + +S++L ++S DKT+++WD + CL+T GH+N+V +F+P Sbjct: 44 VSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWD-VRSGKCLKTLKGHSNYVFCCNFNP 135
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 33/93 (35.48%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 438 VTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 V+ FS +G+ LAS+ D+ +++W + + E T HN I+DV + +S++L ++S DKT+++WD + CL+T GH+N+V +F+P Sbjct: 44 VSSVKFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWD-MRSGKCLKTLKGHSNYVFCCNFNP 135
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: WD51A_HUMAN (WD repeat-containing protein 51A OS=Homo sapiens GN=WDR51A PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 3 Query: 414 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 S+ + + V C FS DG+L+ SA DK V +W+ + + + +H +T V F P+ T +A + D TV++WD + + LQ Y H+ V L FHP Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-VRTHRLLQHYQLHSAAVNGLSFHP 239
BLAST of CX291474 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 414 SIRKSSSKVTCCHFSSDGKLLASAGHDKKVVVWNMENFQTECTPDDHNHIITDVRFRPNSTQLATSSFDKTVRIWDAAKPNFCLQTYTGHNNHVMSLDFHP 716 S+ + + V C FS DG+L+ SA DK V +W+ + + + +H +T V F P+ T +A + D TV++WD + + LQ Y H+ V +L FHP Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-VRTHRLLQHYQLHSAAVNALSFHP 239 The following BLAST results are available for this feature:
BLAST of CX291474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291474 ID=CX291474; Name=CX291474; organism=Citrus clementina; type=EST; length=745bpback to top |