CX291485
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP4_ARATH (Phosphoenolpyruvate carboxylase 4 OS=Arabidopsis thaliana GN=PPC4 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.184e-47 Identity = 93/121 (76.86%), Postives = 110/121 (90.91%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFFQST++LIEMVL KAD + K YDE LVSE R+ LG ELR+EL+TTEKYVLV+SGHEKL ++N+SL++LI+SRLPYLN MNMLQVEILKRLR+D+DN+KLRDALLIT+NGIAAGMRNTG Sbjct: 912 PFFQSTLELIEMVLAKADIPMTKHYDEQLVSEKRRGLGTELRKELMTTEKYVLVISGHEKLLQDNKSLKKLIDSRLPYLNAMNMLQVEILKRLRRDEDNNKLRDALLITINGIAAGMRNTG 1032
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP2_CHLRE (Phosphoenolpyruvate carboxylase 2 OS=Chlamydomonas reinhardtii GN=Ppc2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.829e-33 Identity = 71/122 (58.20%), Postives = 94/122 (77.05%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQE-LGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFF ST+DLIEM+L K D IA Y+EVLV++ ++ LGAELR L + +L V+GHE L NN +L +LI R P+++P+N+LQVE+L+RLRQD +N +LRDALLI++NGIAAGMRNTG Sbjct: 1100 PFFGSTVDLIEMILAKTDPRIAALYEEVLVNDPEEKKLGAELRERLQRCQGAILKVTGHENLLSNNPTLSKLISMRSPFVDPINILQVEVLRRLRQDPNNMRLRDALLISINGIAAGMRNTG 1221
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_NITEC (Phosphoenolpyruvate carboxylase OS=Nitrosomonas eutropha (strain C91) GN=ppc PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.318e-22 Identity = 53/122 (43.44%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLV-SESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFFQ+ + ++MVL K+D IA RY E++ SE RQ + +R E K++ ++GH +L ++N +L R I R PY++PMN LQVE+L+R R DD+ +R A+ +T+NG+A G+RN+G Sbjct: 812 PFFQTLLSNMDMVLAKSDLGIASRYAELVTDSELRQYVFTAIRTEWELCVKWLFAITGHTELLQDNPTLARSIRIRTPYIDPMNHLQVELLRRYRSGDDDDAIRRAIHLTINGVATGLRNSG 933
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_MARMS (Phosphoenolpyruvate carboxylase OS=Marinomonas sp. (strain MWYL1) GN=ppc PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.318e-22 Identity = 52/121 (42.98%), Postives = 86/121 (71.07%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFF + +D+++MVL KA+ IA+ Y++ LV E Q LG LR +L + V ++ E+L E+N+++R+ I+ R PY++P++ LQ E+L R R+D++N ++ AL+IT+ GIA+GM+NTG Sbjct: 756 PFFGAYLDMLDMVLAKAEPEIAEYYEKRLVGEELQGLGRLLRGKLKQVSELVKMLKKQERLIEDNKTIRQSIDVRNPYIDPLHYLQAELLYRSRKDEENAEVNKALMITMAGIASGMQNTG 876
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_ALCBS (Phosphoenolpyruvate carboxylase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ppc PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.544e-22 Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESR--QELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFFQ +D++EMVL K+D +A Y+E L + LG LR L T + ++G E L +NN +R I R PY +P+++LQ E++ RLRQ D + L AL++T+ GIAAG+RNTG Sbjct: 766 PFFQGVVDMLEMVLAKSDLRVAAWYEERLAGDDPGLMRLGEVLRERLTATVSALSALTGREDLLDNNPVMRWSIRVRDPYTDPLHLLQAELMARLRQQDGDETLESALMVTIAGIAAGLRNTG 888
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_NITEU (Phosphoenolpyruvate carboxylase OS=Nitrosomonas europaea GN=ppc PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.234e-20 Identity = 48/122 (39.34%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVS-ESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PF Q+ + ++MVL K+D IA RY E++ E RQ + +R E K++ ++G+ +L ++N +L R I R PY++P+N LQ+E+L+R R DD+ +R A+ +T+NG+A G+RN+G Sbjct: 812 PFLQTLLSNMDMVLSKSDLGIASRYAELVTDPELRQSVFTSIRTEWELCMKWLFAITGYSELLQDNPTLARSIRIRTPYIDPLNHLQIELLRRYRSGDDDDTVRRAIHLTINGVATGLRNSG 933
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_PSEHT (Phosphoenolpyruvate carboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ppc PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.590e-20 Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHK--LRDALLITVNGIAAGMRNTG 365 PFF+S ++++EMV KAD+ +++ YD LV + + LG LR+EL V +S + L + ++ I R PY +P+N+LQVE+L+R R D+ + + +AL+IT+ GIAAGMRNTG Sbjct: 759 PFFRSRLEMLEMVFSKADSWLSEHYDNALVEDMYKPLGVTLRKELAEAISLVQSLSPQKSLLADQPWIKESIALRNPYTDPLNVLQVELLRRARSSDNGSEGDIDNALMITMTGIAAGMRNTG 881
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_PSEU5 (Phosphoenolpyruvate carboxylase OS=Pseudomonas stutzeri (strain A1501) GN=ppc PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.044e-19 Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEIL--KRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFF + ID++EMVL KAD IA+RYDE LV LG++LR L + VL ++G L +++ + R YL+P++++Q+E+L R RQ L ALL++V GIAAG+RNTG Sbjct: 757 PFFSTRIDMLEMVLAKADADIARRYDERLVQPELLSLGSDLRDRLSQVIEAVLSLTGQSDLLDHSPKTQEAFSLRNTYLDPLHLMQIELLARSRQRQGPAESPLEQALLVSVAGIAAGLRNTG 879
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_NOCFA (Phosphoenolpyruvate carboxylase OS=Nocardia farcinica GN=ppc PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.044e-19 Identity = 46/122 (37.70%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSES-RQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFF++ + + V+ K+D IA RY E++ + R ++ +R E T + ++GH++L +NRSL I +R PYL P+N +QVE+L+RLR DD+ ++ +L+T+NG+A +RN+G Sbjct: 802 PFFRTVLSNLAQVMAKSDLDIAARYAELVDDAALRDQIFGMIREEHARTLRMHAAITGHDQLLADNRSLAESIHNRFPYLEPLNQMQVELLRRLRSGDDSELVKRGILLTMNGLATALRNSG 923
BLAST of CX291485 vs. ExPASy Swiss-Prot
Match: CAPP_PSEMY (Phosphoenolpyruvate carboxylase OS=Pseudomonas mendocina (strain ymp) GN=ppc PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19 Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 3 PFFQSTIDLIEMVLGKADTHIAKRYDEVLVSESRQELGAELRRELLTTEKYVLVVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILK--RLRQDDDNHKLRDALLITVNGIAAGMRNTG 365 PFF++ ID++EMVL KAD IA YD+ LV + Q LGA+LR L VL ++G +L ++ I R YL+P+++LQ E+L RLRQ L ALL++V GIAAG+RNTG Sbjct: 756 PFFRTRIDMLEMVLAKADASIAALYDQRLVEPALQPLGAQLRDLLSQACAAVLELTGQSRLLAHSPETLESISVRNTYLDPLHLLQAELLARCRLRQQAPESPLEQALLVSVAGIAAGLRNTG 878 The following BLAST results are available for this feature:
BLAST of CX291485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 221
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291485 ID=CX291485; Name=CX291485; organism=Citrus clementina; type=EST; length=627bpback to top |