CX291486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.288e-69 Identity = 130/221 (58.82%), Postives = 156/221 (70.59%), Query Frame = 2 Query: 14 ALLYVPPGVYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYXXXXXXXXXXYMSFIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETSGG 673 A LYVP G +LTGSF+LTSH TL+L + AV+ A+QD WP+I PLPSY Y S I G L DV+ITG+NGTIDGQG +WW + L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T SP+S IA+GSE SGG Sbjct: 98 AQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGG 318
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.968e-19 Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 2 Query: 212 DGLQDVVITG-ENGTIDGQGAIWW--NMWRQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 DG+ ++ + G + G +DG G WW + R + P T+ P + F NS+S+I+ N+ +N+ I CSNV + V + APADSPNTDGI ++ N+ + +S I TGDD ++++SG S + I +T P GI++GS Sbjct: 153 DGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQINDIT-CGPGHGISIGS 293
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.529e-17 Identity = 53/134 (39.55%), Postives = 77/134 (57.46%), Query Frame = 2 Query: 218 LQDVVITGENGTIDGQGAIWWNMWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEY---GIAYGHPSSGITI 610 ++ +VI G+ G I+GQG+ WW +RP ++F + ++ +S + +SP +IH C+ V I + I AP SPNTDGID +SSNV I+D I+TGDD +A+ SG GI G P GI+I Sbjct: 112 IEGLVIEGD-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCG-PGHGISI 237
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=peh PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.829e-15 Identity = 74/227 (32.60%), Postives = 106/227 (46.70%), Query Frame = 2 Query: 38 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYXXXXXXXXXXYMSFIHGDGLQDVVITGENGTIDGQGAI--------WWNMW---RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN--VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS--GWDE-YGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 670 V+L+G +L S ++L + KG ++A + ++ PS +FI + I G GTIDGQG + WW++ + + L P LI+ S++ + NV NSP N H V+ TI P+ + NTDGIDP SS N+ I S ISTGDD VA+K+ G E I+ H G TG G+++GSET G Sbjct: 77 VFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSFE---NAPSSCGVVDTNGKGCDAFITATSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKAYKGRSETRNISILHNEFG------TG----HGMSIGSETMG 287
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14 Identity = 59/163 (36.20%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 200 FIHGDGLQDVVITGENGTIDGQGAIWWNMWRQRTLPFT------RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 670 ++H L D + G G IDGQG WW+ + T RP I+ S+S+ + + NSP +++ C V I+ + I AP DSPNTDGID +S IE I TGDD VAV +G SS ITI+ +T P G+++GS G Sbjct: 140 WMHFARLTDFNLMG-TGVIDGQGNRWWSDQCKTINGRTVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTG-----------SSNITIKDLT-CGPGHGMSIGSLGKG 289
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR2_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=pehA PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.550e-14 Identity = 71/227 (31.28%), Postives = 104/227 (45.81%), Query Frame = 2 Query: 38 VYLTGSFNLTSHMTLYLAKGAVIKATQDTWNWPLIAPLPSYXXXXXXXXXXYMSFIHGDGLQDVVITGENGTIDGQGAI--------WWNMW---RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN--VVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKS---GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 670 V+L+G +L S ++L + KG ++A + ++ PS +FI + I G GTIDGQG + WW + + + L P LI+ S++ + NV NSP N H V+ TI P+ + NTDGIDP SS N+ I S I+TGDD VA+K+ + I+ H G TG G+++GSET G Sbjct: 77 VFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSFE---NAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFG------TG----HGMSIGSETMG 287
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.860e-14 Identity = 42/102 (41.18%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 374 QNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETSGG 673 +N+ W IHP C ++ TI+AP DSPNTDG +P+S NV I S GDD +AVK+G H + GIT+R G+ +GSE SGG Sbjct: 41 RNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGG 142
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.860e-14 Identity = 53/143 (37.06%), Postives = 73/143 (51.05%), Query Frame = 2 Query: 248 GTIDGQGAIWW----NMWRQRTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 658 G IDGQG WW + RT+ RP I+ S+S+ + + NSP +++ C V I+ + I AP DSPNTDGID +S IE I TGDD +A+ +G SS ITI+ + P GI++GS Sbjct: 154 GVIDGQGQQWWAGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKDLI-CGPGHGISIGS 284
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.288e-13 Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 212 DGLQDVVITGENGTIDGQGAIWW--NMWRQRTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 670 D +Q++V+ G GTI+G G +WW + ++LP P + F N +++ ++N+ +N+ +I C+NVV + I A A SPNTDG+ ++ + I D+ I TGDD +++ SG S + +T P GI++GS SG Sbjct: 161 DSVQNLVVGG-GGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSG-----------SQNVQATNIT-CGPGHGISIGSLGSG 303
BLAST of CX291486 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.288e-13 Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 212 DGLQDVVITGENGTIDGQGAIWW-NMWRQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY--CSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSG 559 D +Q++++ G GTI+G G IWW N + + P P + F ++++ N+ Q++ IH ++ C NV +T+ AP DSPNTDGI ++ N+ I S I TGDD +++ SG Sbjct: 182 DNVQNLLVVGP-GTINGNGNIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQ--QIHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSG 300 The following BLAST results are available for this feature:
BLAST of CX291486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291486 ID=CX291486; Name=CX291486; organism=Citrus clementina; type=EST; length=673bpback to top |