CX291504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1) HSP 1 Score: 413.69 bits (1062), Expect = 5.263e-115 Identity = 192/246 (78.05%), Postives = 214/246 (86.99%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 RSLPWRPPT+VFRVKEDVRPIFWANRPKSY+SRT+GWDQYP GRWGDSRNPSYGAL+D+QF RPR R KKL EEWAVP+KSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL KIN KGFLTINSQPAVNGERSDS+SVGWGGPGGYVYQKAYLEFFCS EKL L++KSK P +T++AVNK+G +N+ VNAVTWGVFP KEI+QPTVVD ASF VWK AFEIW + WA L+ Sbjct: 310 RSLPWRPPTNVFRVKEDVRPIFWANRPKSYISRTLGWDQYPHGRWGDSRNPSYGALTDYQFTRPRGRGKKLQEEWAVPVKSVEDINERFMNFCQGKLTSSPWSELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERSDSTSVGWGGPGGYVYQKAYLEFFCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIPTNAVNAVTWGVFPGKEIVQPTVVDSASFMVWKDEAFEIWSKGWACLF 555
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2) HSP 1 Score: 411.379 bits (1056), Expect = 2.612e-114 Identity = 192/246 (78.05%), Postives = 211/246 (85.77%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 RSLPWR P +VFR KEDVRPIFWANRPKSY+SRT GW+ +P+GRWGDSR+ SYGALSDHQF RPR+RDKKL +EW VPLKSVEDI EKFK CLG L+SSPWSELDGLQPET+IINEQL K+N KGFLTINSQP+VN ERSDS +VGWGGP GYVYQKAYLEFFCS EKL A+V+K K LP IT+MAVNK W +N Q DVNAVTWGVFPAKEIIQPT+VDPASF VWK AFE W RSWA+LY Sbjct: 310 RSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWEDFPQGRWGDSRSASYGALSDHQFSRPRARDKKLQQEWVVPLKSVEDIQEKFKELCLGNLKSSPWSELDGLQPETRIINEQLIKVNSKGFLTINSQPSVNAERSDSPTVGWGGPVGYVYQKAYLEFFCSKEKLDAVVEKCKALPSITYMAVNKGEQWVSNTAQADVNAVTWGVFPAKEIIQPTIVDPASFNVWKDEAFETWSRSWANLY 555
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1) HSP 1 Score: 406.757 bits (1044), Expect = 6.434e-113 Identity = 183/246 (74.39%), Postives = 209/246 (84.96%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 RSLPWR P +VFR KEDVRPIFWANRPKSY+SRT GW+ +P GRWGDS + +Y LSD+QF RP+ RDKKL +EW VPLKS+ED+ EKFK C+G L+SSPWSELDGLQPETKIINEQLGKIN GFLTINSQP+VN +SDS ++GWGGPGGYVYQKAYLEFFCS +KL LV+KSK P IT+MAVNK NW +N ++DVNAVTWGVFPAKE+IQPT+VDPASFKVWK AFEIW RSWA+LY Sbjct: 310 RSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWNDFPHGRWGDSHSAAYSTLSDYQFARPKGRDKKLQQEWVVPLKSIEDVQEKFKELCIGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGPGGYVYQKAYLEFFCSKDKLDTLVEKSKAFPSITYMAVNKSENWVSNTGESDVNAVTWGVFPAKEVIQPTIVDPASFKVWKDEAFEIWSRSWANLY 555
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.170e-112 Identity = 187/246 (76.02%), Postives = 208/246 (84.55%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 R LPWRP T+VFRVKEDVRPIFWANRPKSYL RT+GWDQYP GRWGDSRNPSYGAL+DHQF RPR R KKL EEWAVPLKSVEDI E+F N+C GKL SSPWSELDGLQPETKII++QL IN KGFLTINSQPAVNGE+SDS +VGWGGPGGYVYQKAYLEFFC+ EKL L++K K P +T++AVNK+G +N++ VNAVTWGVFP KEIIQPTVVD ASF VWK AFEIW R W ++ Sbjct: 310 RPLPWRPATNVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHGRWGDSRNPSYGALTDHQFTRPRGRGKKLQEEWAVPLKSVEDISERFTNFCQGKLTSSPWSELDGLQPETKIIDDQLVNINQKGFLTINSQPAVNGEKSDSPTVGWGGPGGYVYQKAYLEFFCAKEKLDQLIEKIKAFPSLTYIAVNKDGETFSNISPNAVNAVTWGVFPGKEIIQPTVVDHASFMVWKDEAFEIWTRGWGCMF 555
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 232.261 bits (591), Expect = 2.172e-60 Identity = 117/256 (45.70%), Postives = 158/256 (61.72%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 R LPW H R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E ++E F Y G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +EIIQPTVVDP SF WK AF +W+ W LY Sbjct: 345 RPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLY 599
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.319e-60 Identity = 117/256 (45.70%), Postives = 157/256 (61.33%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 R LPW H R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S + L + W L S E ++E F Y G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +EIIQPTVVDP SF WK AF +W+ W LY Sbjct: 345 RPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPRELLLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLY 599
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.408e-59 Identity = 114/256 (44.53%), Postives = 159/256 (62.11%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 R LPW H R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E ++E F++Y G ++ PW++ + L ET ++ E+L ++N G LTINSQP +N + S VGWG GGYV+QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +EIIQPTVVDP SF WK AF +W+ W LY Sbjct: 344 RPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQDWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPREELLKMWGEELTSEESVFEVFEHYLSGEPNRHGYRVTCLPWND-EPLAAETSLMKEELLRVNRLGILTINSQPNINAKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKTYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLY 598
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.838e-59 Identity = 114/256 (44.53%), Postives = 159/256 (62.11%), Query Frame = 3 Query: 3 RSLPWRPPTHVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 R LPW H R EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W L S E +++ F ++ G K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +EIIQPTVVDP SF WK AF +W+ W LY Sbjct: 344 RPLPWALSAHPKRRVEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFQVFAHHLSGEPNQNGYKVTCLPWND-EPLAAETSLMKEELLRVNRRGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKKYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIEQWGKLY 598
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 8.838e-54 Identity = 112/262 (42.75%), Postives = 158/262 (60.31%), Query Frame = 3 Query: 3 RSLPWRPPT-HVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMR---PRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------KLRSSPWSELD-GLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPE---KLTALVDKSKVLPFITFMAVNKEGNW-KANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 R PW+ + H R E VRPI+W+ RP+SY++RT WDQ+P GRWG+S +P++G +S + R+ D +L + ++S ED+ F NY K+ PW+E + G+QPET +I+EQL N G LT+NSQP+VNG S VGWG PGGY YQKAYLE F + E KL ++++ + + + A+NK+ + K N +T AVTWGVFP EI QPTVVDP SF+ W+ A+++W+ W Y Sbjct: 358 RVFPWKNRSQHPIRCLESVRPIYWSFRPRSYITRTRDWDQFPNGRWGNSSSPAFGDVSSYYLSNLTTVRNADDRL-AMFGANIESFEDVKRVFINYITQAPNADGVKVTVLPWTEAETGVQPETSLISEQLVWCNENGILTVNSQPSVNGAPSTDPLVGWGKPGGYCYQKAYLECFMTAELSDKLIQIIEREFPVR-VNYHAINKDSTFDKTNSEETTPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQWGDFY 617
BLAST of CX291504 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 7.481e-53 Identity = 106/234 (45.30%), Postives = 141/234 (60.26%), Query Frame = 3 Query: 39 RVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKVLPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKG*AFEIWVRSWASLY 740 R+ E VRPIFW R +SY+SRT WD+ P GRWGDSR+P++G ++ R K++ W P KS +I + F YC K+ S PWS+L + E +I +QL +N FLTINSQPA+NGE+S GWG P GYV+QK Y+EFF P L L + K L +++ NK G+ N NAVTWGVFP +EIIQPT+V+ SF WK A+ + + WA+ Y Sbjct: 318 RINEGVRPIFWRTRNESYVSRTDQWDELPHGRWGDSRSPAFGEFDAIRYGL-RMSPKEITTSWGSP-KSYSEIGDLFARYCEKKISSLPWSDLP-ISDEADLIRDQLLSMNRNAFLTINSQPALNGEKSSHPVFGWGPPNGYVFQKPYVEFFVHPSLLNELKETVKKLNSVSYFVTNKNGDLDTNSQYEIPNAVTWGVFPNREIIQPTIVESTSFLAWKDEAYSLGM-EWANAY 547 The following BLAST results are available for this feature:
BLAST of CX291504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291504 ID=CX291504; Name=CX291504; organism=Citrus clementina; type=EST; length=741bpback to top |