CX291842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.048e-32 Identity = 68/80 (85.00%), Postives = 77/80 (96.25%), Query Frame = 3 Query: 6 TEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 245 TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVLTQIY+IVSKRAVEAG +G++S LPSKG+TINVK+DSSVLKR GCCS Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 8.302e-30 Identity = 64/82 (78.05%), Postives = 73/82 (89.02%), Query Frame = 3 Query: 3 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 248 STEDGKAFAE+ESLYFMETSAL+ATNVENAF+EVLTQIY+IVSKRAVEAG + S +PS+G+TINV +DSSVL R CCSN Sbjct: 137 STEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.120e-29 Identity = 64/81 (79.01%), Postives = 73/81 (90.12%), Query Frame = 3 Query: 6 TEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 248 TE+ KAFAE+ESLYFMETSALDATNVENAFTEVLTQI+KIVSKR+V+ G G ++ LP KGETINVK+D SVLKR+GCCSN Sbjct: 138 TEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.465e-26 Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 3 Query: 3 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 248 ST++ K AE+E LYFMETSAL+ATNVENAFTE LTQIY+IVSK+AVEAG G S+ P KGETIN+KD+ S K+ GCCS+ Sbjct: 137 STDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 3.610e-25 Identity = 57/80 (71.25%), Postives = 69/80 (86.25%), Query Frame = 3 Query: 6 TEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 245 T++GKAFAE+ESLYFMETSAL++TNVENAF EVLTQIY+IVSKR+VEAG + A + P KGE IN+KDD S +K+ GCCS Sbjct: 139 TDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.372e-24 Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 3 Query: 6 TEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 248 TEDGK++AEQESL FMETSAL+ATNVE+AF EVLTQIY+I SK+ VEAG +G AS KGE I VK+D S LK++GCCSN Sbjct: 138 TEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22 Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 3 Query: 6 TEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 248 TED K+FAE+ESLYFMETSAL+ATNVENAF EVLTQI+ IVSK+A+EA S ++ +PSKG+ I++ D S +K+ GCCSN Sbjct: 138 TEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCSN 216
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.419e-21 Identity = 53/83 (63.86%), Postives = 69/83 (83.13%), Query Frame = 3 Query: 3 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCSN 248 STED KAFAE+E+ +FMETSAL++ NVENAFTEVLT+IYK+V ++A+E G + A LP KG+TINV KDD S +K++GCCS+ Sbjct: 138 STEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAA--LP-KGQTINVGKDDVSAVKKVGCCSS 217
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.164e-15 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 3 Query: 3 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 245 S +DG A +E+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+ A +++P +G TINV D S K+ GCCS Sbjct: 136 SEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNTKK-GCCS 215
BLAST of CX291842 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.776e-15 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 3 Query: 3 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 245 S +D +A ++E L F+ETSAL+A NV+ AF +LT IY I+SK+A+ A ++ LP +G TINV D+S+ +KR GCCS Sbjct: 136 SEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTINVSDNSANVKR-GCCS 215 The following BLAST results are available for this feature:
BLAST of CX291842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291842 ID=CX291842; Name=CX291842; organism=Citrus clementina; type=EST; length=545bpback to top |