CX294803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.092e-53 Identity = 101/110 (91.82%), Postives = 103/110 (93.64%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTDENLLSQIKDGF GKDLVVSV AMGEE+I +LKDIGPK Sbjct: 50 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.092e-53 Identity = 101/110 (91.82%), Postives = 102/110 (92.73%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTDENLLS IKDGF GKDLVVSV AMGEEQINALKDIGPK Sbjct: 50 TGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.426e-53 Identity = 100/110 (90.91%), Postives = 103/110 (93.64%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTD++LLSQIKDGF GKDLVVSV AMGEEQINALKDIGPK Sbjct: 50 TGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 2.433e-53 Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDENLL Q+KDGF+ GKDLVVSV AMGEEQINA+KD+G K Sbjct: 50 TGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 4.149e-53 Identity = 100/110 (90.91%), Postives = 102/110 (92.73%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+NLL+QIKDGF GKDLVVSV AMGEEQI ALKDIGPK Sbjct: 50 TGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 5.419e-53 Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE+LL Q+KDGF+ GKDLVVSV AMGEEQINA+KDIG K Sbjct: 50 TGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.059e-52 Identity = 99/110 (90.00%), Postives = 102/110 (92.73%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD+ LL+QIKDGF GKDLVVSV AMGEEQI ALKDIGPK Sbjct: 50 TGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 3.513e-52 Identity = 96/110 (87.27%), Postives = 104/110 (94.55%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD+PHV RT+YQLIDISEDGFVSLLT +GNTKDDLRLPTDE L++QIK+GFESGKDLVV+VQ AMGEEQI ALKD+GPK Sbjct: 51 TGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 5.992e-52 Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NG+TKDDL+LPTD++LL+QIKDGF GKDLVVSV AMGEEQI ALKDIGPK Sbjct: 50 TGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CX294803 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.974e-51 Identity = 95/110 (86.36%), Postives = 100/110 (90.91%), Query Frame = -2 Query: 218 TGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALKDIGPK 547 TGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL+Q+KDGF GKDLV+SV AMGEEQI +KDIGPK Sbjct: 50 TGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159 The following BLAST results are available for this feature:
BLAST of CX294803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294803 ID=CX294803; Name=CX294803; organism=Citrus clementina; type=EST; length=548bpback to top |