CX294818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 3.648e-57 Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 SLWFC+YKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQ IP F+M ECYDMELY+W KVD++DE QKERV+Q+IED EPFEGEALLDAKCFK Sbjct: 308 SLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMEECYDMELYNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 5.268e-56 Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 SLWFCDYKYNDENTVSFVT+NKVGGFLQRMDL RKYAFGKMLVIGSEPPFKVKGLWLFRG IP+F+M E YDMELY+W KVDI+DEAQKERVS MIED EPFEGEALLDAKCFK Sbjct: 304 SLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 1.174e-55 Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 SLWFCDYKYNDENTVSFVT+NKVGGFLQRMDL RKYAFGKMLVIGSEPPFKVKGLWLFRG IP+F+M E YDMELY+W KVDI+DEAQKERVS MIED EPFEGE+LLDAKCFK Sbjct: 304 SLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 5.824e-55 Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 SLWFCDYKYNDENTVSFVT+NKVGGFLQRMDL RKYAFGKMLVIGS PPFKVKGLWLFRGQ IP+F+M E YDMELY+W KVD++DEAQKERV+ MIED EPFEGE LLDAKCFK Sbjct: 302 SLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 7.607e-55 Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 SLWFCDYKYNDEN VSFVTLNKVGGFLQRMDLARKY+FGKML+ GSE PFKVKGLWLFRG IP+FIM E YDMELY+W KVDI+DEAQKERVSQMIED EPFEGEALLDAKCFK Sbjct: 299 SLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 7.607e-55 Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 SLWFCDYKYNDEN VSFVTLNKVGGFLQRMDLARKY+FGKML+ GSE PFKVKGLWLFRG IP+FIM E YDMELY+W KVDI+DEAQKERVSQMIED EPFEGEALLDAKCFK Sbjct: 300 SLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G_TRYCR (Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.657e-17 Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 3 Query: 9 WFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 ++C YKYN++N + F+T N + G+ QRM+ RKYAFG L+IG E + LW+FRG+ +P I+ + D EL+DW++V + AQ+ER++ + P +L+ + FK Sbjct: 301 FWCRYKYNEDNKMQFMTANLIRGWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRGMPA-IVEDVEDTELFDWEEV-ADVAAQRERITDYLSWEGPTIPRPVLEGRVFK 411
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14 Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQ 287 S+WF +YKYN+E + F++ N + G QR+D RK AF + + G + + G+W++RGQ + + + D E+YDWKK+D E K+ V+Q Sbjct: 315 SIWFGEYKYNEELSKVFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAKSEETKKLVTQ 410
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14 Identity = 37/108 (34.26%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYECY--DMELYDWKKVDINDEAQKERVSQMIEDHEPFEGE 320 S+W+ +Y++ +E T+SF++ N + G QR+D RK AF +++ G+ + G+W+FRGQ + F + E + D E Y W+K+D++ E K M++++ +EGE Sbjct: 325 SIWYAEYRFPEELTMSFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQEL-AFTLSEDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427
BLAST of CX294818 vs. ExPASy Swiss-Prot
Match: EF1G_CAEEL (Probable elongation factor 1-gamma OS=Caenorhabditis elegans GN=F17C11.9 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.476e-13 Identity = 34/116 (29.31%), Postives = 65/116 (56.03%), Query Frame = 3 Query: 3 SLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQVIPQFIMYEC-YDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 347 S+W C+YKY ++ T++F++ N + G QR++ +K AF M++ G++ + G+W+++G + + + D E Y W K+D +A K+ V++ + F G+ K FK Sbjct: 283 SIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKKFNQGKIFK 398 The following BLAST results are available for this feature:
BLAST of CX294818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294818 ID=CX294818; Name=CX294818; organism=Citrus clementina; type=EST; length=491bpback to top |