CX294970

Overview
NameCX294970
Unique NameCX294970
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:214..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294970 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26
Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = -2
Query:  261 GGGGVSLHGGRNGYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGR-SFEDGVRRLVL 695
            GGGG++L       CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC   C+++GR S +DG  RL L
Sbjct:   55 GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CX294970 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.366e-21
Identity = 58/156 (37.18%), Postives = 88/156 (56.41%), Query Frame = -2
Query:  237 GGGVSLHGGR-NG--YCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAF 692
            GGG+++     NG   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:   60 GGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CX294970 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = -2
Query:  252 GGGGVSLHG-GRNGYCPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFED-GVRRLVLVRD 695
            GGGG++++G G    CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YK   CPS   + +  CNNV   F+   +RRL+L  D
Sbjct:   30 GGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CX294970 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 52/159 (32.70%), Postives = 80/159 (50.31%), Query Frame = -2
Query:  222 GGGGVSLHGGRNGYCPLDVIQLPSDMQNGIELTL-SPYNNSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAFPVVLI 695
            GGGGV     R   CP+ +IQ  SD+Q G+ +   SP  +   +   T+L + F      +  C E   W +      SG+  +  GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C+++G ++E G R LVL   D+  F VV +
Sbjct:   30 GGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEF----VEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVLKSSDDSPFRVVFV 175          
The following BLAST results are available for this feature:
BLAST of CX294970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC2.405e-2643.2421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.366e-2137.18Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA3.720e-1939.47Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE1.788e-1332.70Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionC05065B09SK DroRLeaf1 Citrus clementina cDNA clone C05065B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294970 ID=CX294970; Name=CX294970; organism=Citrus clementina; type=EST; length=696bp
TTTTTCTTTTTTGAATAAAACAAAGAACACTTGATTTCGATTTTCATAAG
GTATACACCAACAGTAGAATTTATTAACCCCGAAAGGATCACAGGGTACT
TATTCATAATTTTAATCCTAGAGATTAAAGAGCAGCTAGCCTGGTCCGTT
ATTTAGAATAATAATACCGCTAGCTGGTTAGGGTACATTGATTACACAGA
CGTTGATCTTTCTGTAGCGGGAATTAACACAACAGGAAATGCCGGCTCAT
CATCACGAACCAGAACCAGACGTCGAACGCCATCCTCAAACGAACGGCCA
ACGTTGTTGCAGTGTTTGACACAAGACTCGCAAACGGATGGACAATGAAC
GATTTTGTATGTACCTGGAAAATTTCCAATTTTCTCAAGCTTAAACCAAT
TTAGCAAAGTTTCAGCTCCAGGATGACCATCAAGTCCCCCGGTTGTTATA
AACCATTTGCCTGATGCAGCGTCATAATTATCAACTTTCCACAACGGTTG
TTCGTTACAATAGTCACGTCCAGATAGCAACACTGAGAATCTCAAGTTGA
GATCAGTGGATTCTCGGACAATTGTAGAATTGTTATACGGTGACAGTGTT
AATTCGATTCCATTTTGCATATCAGAAGGTAATTGGATAACGTCCAGCGG
ACAATATCCGTTTCTGCCACCGTGTAGGCTAACTCCACCACCGCCA
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