CX295065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.404e-56 Identity = 114/169 (67.46%), Postives = 135/169 (79.88%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLRE 690 MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAL+IFSPR KLYEFSS SI TIERYQ++ K+IG N K D+SQ A++ETS + K+E LE++KRKLLG+G++ C+I+ELQQLENQL+RSLSRIRA+K QL RE+ N L+E Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGNNHK-RNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKE 168
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.530e-52 Identity = 106/169 (62.72%), Postives = 128/169 (75.74%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLRE 690 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV+LIIFSP+GKLYEF+S ++ TI+RY + TKD + E++ QH K E +NMM K+E LE +KRKLLG+G+ C+I+ELQQ+E QLE+S+ IRARK Q+F+EQ N KL E Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSE 169
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 2.530e-52 Identity = 107/150 (71.33%), Postives = 129/150 (86.00%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF SS SI KT+ERYQK+ +D+G N K D+SQ +K+ET + K+E LE++ RK++G+GL+ +I+ELQQLENQL+RSL +IRA+K QL RE+ Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHK-RNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREE 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.181e-47 Identity = 103/169 (60.95%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQXXXXXXXXXXXXXRNTKLRE 690 MVRGKTQMKRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRGKLYEF+S S KTIERY+ TK+ I +K V+ + K + + KLE LE KRKLLG+ L+ C+I+EL LE +LERSL IR RK +L EQ N +LRE Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKE-NIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELRE 168
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 4.326e-44 Identity = 91/150 (60.67%), Postives = 119/150 (79.33%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC-SINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 MVRG+T++KRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRG+LYEF+S S+ KTI+RY+ TKD +N+K ++ Q K++T + KLE L+ ++RK+LG+ LE C+I+EL+ LE +LE+SL IR +K +L Q Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQ 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.804e-43 Identity = 90/150 (60.00%), Postives = 120/150 (80.00%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC-SINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 MVRG+T++KRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRG+LYEF+S S+ KTI+RY+ TKD +N+K ++ Q K++T + KLE L+ ++RK+LG+ LE +I+EL+ LE +LE+SL +IR +K +L +Q Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQ 149
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39 Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDI-GINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF S INKT+E+Y + G NS + Q +E S + TKLE L+ ++R +LG+ L P +I ELQQLE QLE SLS+ R RK Q+ EQ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQ 150
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.761e-37 Identity = 75/146 (51.37%), Postives = 112/146 (76.71%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVA-KRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 M RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+++ S+ T+ERY+K D + + E ++QH ++E+S + ++ L+ A R ++GD + ++ +L+Q+EN+LE+ +++IRARKN+L Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNEL 146
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37 Identity = 74/145 (51.03%), Postives = 114/145 (78.62%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQL 618 M RGK ++KRIEN+T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+++ +I TIERY+K D S + E ++ + ++E++ + +++ ++ + R L+GD L ++ EL+Q+EN+LE+++SRIR++K++L Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHEL 145
BLAST of CX295065 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.122e-37 Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 1 Query: 184 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQLERSLSRIRARKNQLFREQ 630 M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF S I KT+ERYQ + ++ + + +Q E S + K E L+ +R LLG+ L P ++ ELQQLE QLE +LS+ R RK QL EQ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSE-TQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQ 148 The following BLAST results are available for this feature:
BLAST of CX295065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295065 ID=CX295065; Name=CX295065; organism=Citrus clementina; type=EST; length=692bpback to top |