CX295071
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: GTE6_ARATH (Transcription factor GTE6 OS=Arabidopsis thaliana GN=GTE6 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.117e-56 Identity = 105/151 (69.54%), Postives = 121/151 (80.13%), Query Frame = 1 Query: 22 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 474 S S SI K+ K RHV I K QQ+A RE A +RMQ+L RQF IFRQITQHK AWPFMHPV+VEGLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V +IYAD+RLVF+NAM YN+E DV+ MAK LLEKFEEKW LPKV EE Sbjct: 55 SNSGSIGKDTEKGRHVVGIRKIQQEAARREAVAAKRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEE 205
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRD2_RAT (Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 79 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 471 + QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE ++ ++ + +E Sbjct: 332 DSQQQ---HQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 458 HSP 2 Score: 76.6406 bits (187), Expect = 1.299e-13 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 121 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVM 483 GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y E D +F N YN DD+ +MA++L + F +K + +P+ +ELV+ Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VASMPQEEQELVV 188
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRD2_MOUSE (Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 79 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 471 + QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE ++ ++ + +E Sbjct: 332 DSQQQ---HQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 458 HSP 2 Score: 76.6406 bits (187), Expect = 1.299e-13 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 121 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVM 483 GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y E D +F N YN DD+ +MA++L + F +K + +P+ +ELV+ Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VASMPQEEQELVV 188
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRD2_HUMAN (Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 79 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 471 + QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE ++ ++ + +E Sbjct: 333 DSQQQ---HQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459 HSP 2 Score: 76.6406 bits (187), Expect = 1.299e-13 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 121 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVM 483 GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y E D +F N YN DD+ +MA++L + F +K + +P+ +ELV+ Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VASMPQEEQELVV 189
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRD2_CANFA (Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 79 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 471 + QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE ++ ++ + +E Sbjct: 333 DSQQQ---HQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459 HSP 2 Score: 76.6406 bits (187), Expect = 1.299e-13 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 121 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVM 483 GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y E D +F N YN DD+ +MA++L + F +K + +P+ +ELV+ Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VASMPQEEQELVV 189
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRD2_BOVIN (Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20 Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 79 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 471 + QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE ++ ++ + +E Sbjct: 333 DSQQQ---HQSSKKGKLSEQLKH-CNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLE 459 HSP 2 Score: 76.6406 bits (187), Expect = 1.299e-13 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 121 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVM 483 GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y E D +F N YN DD+ +MA++L + F +K + +P+ +ELV+ Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VASMPQEEQELVV 189
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRD4_HUMAN (Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.585e-19 Identity = 58/162 (35.80%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 13 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVMA 486 P K+ + + + R V +K D+ H ++ E + + I +++ K +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N KYN +V MA+ L + FE ++ + +P EE V+A Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAK-MPDEPEEPVVA 467 HSP 2 Score: 78.5666 bits (192), Expect = 3.420e-14 Identity = 43/140 (30.71%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 124 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVMASILVLSGEKTRGGGSEGTT 543 R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y N +E D +F N YN DD+ +MA++L + F +K +L + E +++ + G K G G + Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVS 194
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRD4_MOUSE (Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 57/164 (34.76%), Postives = 91/164 (55.49%), Query Frame = 1 Query: 10 QPNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVMAS 489 +P T+K + + R V +K D+ H ++ E + + I +++ K +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N KYN +V MA+ L + FE ++ ++ + E +V S Sbjct: 313 EPKTAK---LGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVTVS 470 HSP 2 Score: 79.337 bits (194), Expect = 2.005e-14 Identity = 43/140 (30.71%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 124 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVMASILVLSGEKTRGGGSEGTT 543 R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y N +E D +F N YN DD+ +MA++L + F +K +L + E +++ + G K G G + Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGAAKPGVS 194
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRDT_MACFA (Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18 Identity = 61/196 (31.12%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 19 TSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEL----VMASILVLSG-EKTRGGGSEGTT*YATHSGGCPDEQ 582 T KS+++ +K+ ++ Q ++ ++ ++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ + +E + + I +G E T SEG + SG DE+ Sbjct: 236 TEKSVTLPP--IKENMPKNVLPDSQQQYNVVKSV--KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARRLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASSEGNS-----SGASEDER 419 HSP 2 Score: 77.0258 bits (188), Expect = 9.949e-14 Identity = 42/134 (31.34%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 52 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 453 L R A I + + GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K Q+ Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
BLAST of CX295071 vs. ExPASy Swiss-Prot
Match: BRDT_HUMAN (Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1 SV=4) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 58/192 (30.21%), Postives = 99/192 (51.56%), Query Frame = 1 Query: 34 SIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEELVMASILVLSGEKTRGGGSEGTT*YATHSGGCPDEQS*GIKK 600 S+A +K+ ++ Q ++ + ++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ + +E + + I E T G E T ++ D + +K+ Sbjct: 239 SVALPPIKENMPKNVLPDSQQQYNVVKTV--KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETT---GRENTNEASSEGNSSDDSEDERVKR 422 HSP 2 Score: 77.7962 bits (190), Expect = 5.833e-14 Identity = 42/134 (31.34%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 52 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 453 L R A I + + GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K Q+ Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133 The following BLAST results are available for this feature:
BLAST of CX295071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295071 ID=CX295071; Name=CX295071; organism=Citrus clementina; type=EST; length=676bpback to top |