CX295471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295471 vs. ExPASy Swiss-Prot
Match: PUS4_ARATH (RNA pseudourine synthase 4, mitochondrial OS=Arabidopsis thaliana GN=At3g19440 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.944e-27 Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 1 Query: 121 DSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSAS 357 D AIIV+NKPHG+ VQGG GI+ SIDELAA+CL +D SE PRLVHRLDRD SG+LV+ RTQT+ATVLHSIFREKT AS Sbjct: 189 DPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTTGAS 267
BLAST of CX295471 vs. ExPASy Swiss-Prot
Match: PUS4_ORYSJ (RNA pseudourine synthase 4, mitochondrial OS=Oryza sativa subsp. japonica GN=Os09g0103500 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.057e-21 Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 121 DSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSA 354 D AIIV+NKP GMPVQGG+GI+ SID LA+ + SE PRLVHRLDRD SGILV+GR Q S ++LH+IFREKT A Sbjct: 182 DEAIIVVNKPPGMPVQGGVGIKNSIDVLASM-FEENSSEAPRLVHRLDRDCSGILVLGRNQLSTSMLHAIFREKTADA 258
BLAST of CX295471 vs. ExPASy Swiss-Prot
Match: PUS3_ARATH (RNA pseudourine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 121 DSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFRE 339 DSAIIV+NKP +PV+G + I S+D LAA L++ E PRLVHRLDR++SG+LVMGRT+ S LHS+F + Sbjct: 185 DSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSD 257
BLAST of CX295471 vs. ExPASy Swiss-Prot
Match: PUS3_ORYSJ (RNA pseudourine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0520100 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 121 DSAIIVINKPHGMPVQGGIGIRRSIDELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIF 333 DSAI+V+NKP +P++G + + S+D LAA L+Y E P+LVHRLDR+SSG+L+ GRT+ S T LH +F Sbjct: 183 DSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLHWLF 253 The following BLAST results are available for this feature:
BLAST of CX295471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295471 ID=CX295471; Name=CX295471; organism=Citrus clementina; type=EST; length=652bpback to top |