CX295610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.653e-25 Identity = 52/75 (69.33%), Postives = 66/75 (88.00%), Query Frame = 3 Query: 267 DFSEEKPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 ++ ++PPTPLLDT+NYPIHMKNLS ++L+QLA ELR+D++ VSKTGGHL ++LGVVELT+ALH VFNTP DKI Sbjct: 62 EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKI 136
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.653e-25 Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 3 Query: 177 CLRASAEKNSSDGEEATKMVMRKQKGGWKIDFSEEKPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 CL+ + NS A +KG ++ +PPTPLLDTINYPIHMKNLS ++L+QL+ ELR+D++ +VSKTGGHL ++LGVVELT+ALH +FNTP DKI Sbjct: 42 CLKPN--NNSHSNRRAKVCASLAEKG----EYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKI 140
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.547e-23 Identity = 49/75 (65.33%), Postives = 65/75 (86.67%), Query Frame = 3 Query: 267 DFSEEKPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 ++ ++PPTP++DTINYPIHMKNLS ++L+QLA ELR+D + +VSKTGGHL ++LGVVELT+ALH VFN P D+I Sbjct: 65 EYYTQRPPTPIVDTINYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRI 139
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_RHIME (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.726e-19 Identity = 41/69 (59.42%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 285 PPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 P TPLLD ++YP +K + DL QLAAELRA++V++VS+TGGHL A LGVVELT+A+H++F+TP D++ Sbjct: 10 PATPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIFDTPHDRL 78
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.784e-19 Identity = 40/69 (57.97%), Postives = 56/69 (81.16%), Query Frame = 3 Query: 285 PPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 P TPLLD +N+P +K + DL +LA ELR +++++VSKTGGHL A LGVVELT+A+H+VFNTP+D++ Sbjct: 5 PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVFNTPEDRL 73
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.338e-18 Identity = 39/71 (54.93%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 279 EKPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 ++P TP+LD +NYP ++ +S DL Q A ELRA+++++VS+TGGHL ++LGVVEL++A+H VFNTP DK+ Sbjct: 2 DRPHTPILDQVNYPSDLRRMSNADLAQCADELRAEVISAVSETGGHLGSSLGVVELSVAIHAVFNTPYDKL 72
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 3 Query: 279 EKPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDD 485 ++PPTPLLDT++ P ++ L DL QLA ELRA+++++VS TGGHL A LGVVELT+ALH VF+TP D Sbjct: 3 DRPPTPLLDTVSTPEDLRRLKPADLRQLADELRAEMISAVSVTGGHLGAGLGVVELTVALHYVFDTPRD 71
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 3 Query: 285 PPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 P TPLLD + YP ++ L DL QLA E+R +++++VS+TGGHL A LGVVELT+A+H VF+TPDD++ Sbjct: 5 PKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVFDTPDDRL 73
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 3 Query: 285 PPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 P TPLLD + P ++ L + +L QLA+ELR ++V++VS+TGGHL A LGVVELT+ALH VFNTPDD++ Sbjct: 5 PHTPLLDKVRIPADLRALDESELPQLASELRLELVDAVSRTGGHLGAGLGVVELTVALHYVFNTPDDRL 73
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_DECAR (1-deoxy-D-xylulose-5-phosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=dxs PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.268e-17 Identity = 41/65 (63.08%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LL+TIN P ++ L ++ L QLA+ELRA +++SVSKTGGHLS+NLG VELT+ALH VFNTP+D++ Sbjct: 6 LLETINSPADLRRLDRKQLPQLASELRAFLIDSVSKTGGHLSSNLGTVELTIALHAVFNTPEDRL 70 The following BLAST results are available for this feature:
BLAST of CX295610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295610 ID=CX295610; Name=CX295610; organism=Citrus clementina; type=EST; length=493bpback to top |