CX295615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.810e-85 Identity = 159/217 (73.27%), Postives = 183/217 (84.33%), Query Frame = 1 Query: 22 TTSAFLSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 ++SAF+S N+ + D +++ +S+S S+ S H RG S+ ++S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDF Sbjct: 9 SSSAFISANHFSSD--DDSSSPRSISPSL--------ASVFLHHTRGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 215
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 3.670e-85 Identity = 160/226 (70.80%), Postives = 187/226 (82.74%), Query Frame = 1 Query: 4 RWNLQQ---TTSAFLSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 RW ++ ++SAF+S N+ + D +++ +S+S S+ S H RG S+ ++S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTHLGCIPLPNAGDF Sbjct: 14 RWPVRSVAPSSSAFISANHFSSD--DDSSSPRSISPSL--------ASVFLHHTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDF 229
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 6.921e-84 Identity = 153/192 (79.69%), Postives = 166/192 (86.46%), Query Frame = 1 Query: 97 SRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 S SP P S S RG S+ ++S GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDF Sbjct: 34 SSPARSPSPASLASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 225
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.542e-83 Identity = 152/192 (79.17%), Postives = 166/192 (86.46%), Query Frame = 1 Query: 97 SRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 S SP P S S RG S+ ++S GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+EDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDF Sbjct: 34 SSPTRSPSPTSLASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 225
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 2.630e-83 Identity = 150/182 (82.42%), Postives = 166/182 (91.21%), Query Frame = 1 Query: 127 SFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 S TS+ +I G S+ ++S D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTHLGCIPLPNAGDF Sbjct: 12 SVTSNSFSIISGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDF 193
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.908e-82 Identity = 152/192 (79.17%), Postives = 169/192 (88.02%), Query Frame = 1 Query: 97 SRSVNSPLPFSFTSHIPHLIRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 S SP P S TS IRG S+ ++S LGL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYAS +RLLILKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT++DI+LANSVD+ +LRDPQ+D+ RVKNPEWLVVVGVCTHLGCIPLPNAGDF Sbjct: 32 SSPARSPSP-SLTSSFLDQIRGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDF 222
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.156e-77 Identity = 153/214 (71.50%), Postives = 174/214 (81.31%), Query Frame = 1 Query: 37 LSGNYLNDGGCDAAAAAQSLSRSVNSPLPFSFTSHIPHLIRGLSAEALSLGR--DLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 L+G + D D+A S++SP F S RG S+ + R D GL +DLPATVAAVKNP K+VYDE+NHERYPPGD SKRAFAYF+L+GGRF+YASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI+LANSVDVASLR P++D+ RVKNPEWLVV+GVCTHLGCIPLPNAGDF Sbjct: 26 LAGAGVPDRDDDSARGRSQPRFSIDSP--FFVAS------RGFSSTETVVPRNQDAGL-ADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 230
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.604e-32 Identity = 70/154 (45.45%), Postives = 106/154 (68.83%), Query Frame = 1 Query: 214 LPATVAAVKNPTSKIVYDEHNHERYPPGDASK-RAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 L A+ + + P V E+N DA K R++AYF++ + ++ + + F+ SM+A+ DVLA+A +EV+L++I G V VKW+GKPVFIR RT +IQ ANSVD+++L+DPQ D+ RVK+P+WL+++G+CTHLGC+P+ AGDF Sbjct: 27 LLASKSTYRTPNFDDVLKENN-------DADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDF 173
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 67/128 (52.34%), Postives = 94/128 (73.44%), Query Frame = 1 Query: 289 PPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 PP ++ F+YF++ + A+ + I +F+ +MSAS DVLA+A +EVDL++I G V +KWRGKPVFIR RT +I+ AN V+VA+LRDP+ D+ RVK PEWLV++GVCTHLGC+P+ AGD+ Sbjct: 63 PP--STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDY 188
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.789e-31 Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 265 DEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDF 672 D ++ GD S R +Y ++ + A+ + + F+ S SAS DVLA++ EVDLS I G + VKW+GKPVFIR RT E+IQ ANSVD+++LRDPQ DS RV+ PEWLV++GVCTHLGC+P+ AGD+ Sbjct: 52 DFSEYQTKSTGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIGVCTHLGCVPIGEAGDY 186 The following BLAST results are available for this feature:
BLAST of CX295615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295615 ID=CX295615; Name=CX295615; organism=Citrus clementina; type=EST; length=673bpback to top |