CX296349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD_ARATH (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=IVD PE=1 SV=2) HSP 1 Score: 305.449 bits (781), Expect = 1.705e-82 Identity = 150/199 (75.38%), Postives = 171/199 (85.93%), Query Frame = 2 Query: 77 ARSLCASFFTKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 ARS+ + K ++ S + S+SLLFDDTQLQFKESV +FA++NIAP A +ID++NSFP+DVNLWKLMG FNLHGITAP+E HCIAMEEISRASGSV LSYGAHSNLCINQLVR+G+ AQK+KYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA++VDGGYI+NGNKMWCTNGP A+TLVVYAKTD KA Sbjct: 7 ARSILG-YAVKTRRRSFSSRSSSLLFDDTQLQFKESVSKFAQDNIAPHAERIDKTNSFPKDVNLWKLMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKA 204
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD2_SOLTU (Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum tuberosum GN=IVD2 PE=1 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 7.918e-80 Identity = 146/187 (78.07%), Postives = 159/187 (85.03%), Query Frame = 2 Query: 113 QKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 QK A STSLLFDDTQ QFKESV QFA+ENIAP A KID++N FPQDVNLWKLMG+FNL GIT P+E HCIAMEEISRASGSVGLSYGAH+NLCINQLVR+G+ QK KYLPKLISGEHVGALAMSEP+AGSDVV MKCKADRV+GGY++NGNKMWCTNGP AQTLVVYAKTD+ A Sbjct: 10 QKPQFAAFSTSLLFDDTQKQFKESVAQFAQENIAPHAEKIDRTNYFPQDVNLWKLMGDFNLLGITVPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHTNLCINQLVRNGTHEQKQKYLPKLISGEHVGALAMSEPDAGSDVVSMKCKADRVEGGYVLNGNKMWCTNGPTAQTLVVYAKTDVTA 196
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD1_SOLTU (Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum GN=IVD1 PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.345e-78 Identity = 143/205 (69.76%), Postives = 166/205 (80.98%), Query Frame = 2 Query: 68 LLGARSLCASF---FTKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 L RSL ++ F Q AAFS TSLL DDTQ QFKESV +FA+ENIAP A KID++NSFP+++NLWKLMG+FNLHGITAP+E HCIA+EEISRASG+V +SYG SN+CINQLVR+G+P QK KYLPKLISG+H+GALAMSEPNAGSDVV MKC+ADRVDGGY++NGNKMWCTNGPVA TL+VYAKTD A Sbjct: 4 LFAVRSLSSAIAKNFKSLQNQQAAFS-TSLLLDDTQKQFKESVAKFAQENIAPYAEKIDRTNSFPKEINLWKLMGDFNLHGITAPEEYGGLNLGYLYHCIALEEISRASGAVAVSYGVQSNVCINQLVRNGTPDQKQKYLPKLISGDHIGALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWCTNGPVANTLIVYAKTDTTA 207
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD_PONAB (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.504e-54 Identity = 103/172 (59.88%), Postives = 129/172 (75.00%), Query Frame = 2 Query: 158 DTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 + Q Q +++V +F +E++AP+A +ID+SN F WK +GN + GITAP + H + MEEISRASG+VGLSYGAHSNLCINQLVR+G+ AQK+KYLPKLISGE++GALAMSEPNAGSDVV MK KA++ YI+NGNK W TNGP A L+VYAKTD+ A Sbjct: 44 EEQRQLRQTVAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAA 215
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD_HUMAN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD PE=1 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.350e-54 Identity = 102/172 (59.30%), Postives = 129/172 (75.00%), Query Frame = 2 Query: 158 DTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 + Q Q ++++ +F +E++AP+A +ID+SN F WK +GN + GITAP + H + MEEISRASG+VGLSYGAHSNLCINQLVR+G+ AQK+KYLPKLISGE++GALAMSEPNAGSDVV MK KA++ YI+NGNK W TNGP A L+VYAKTD+ A Sbjct: 44 EEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAA 215
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD_MOUSE (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.663e-53 Identity = 100/173 (57.80%), Postives = 128/173 (73.99%), Query Frame = 2 Query: 155 DDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 ++ Q Q + ++ +F +EN+AP+A +IDQ+N F WK +G+ + GITAP + H + MEEISRASG+VGLSYGAHSNLC+NQ+VR+G+ AQK+KYLPKLISGE +GALAMSEPNAGSDVV MK KA++ Y++NGNK W TNGP A LVVYAKTD+ A Sbjct: 44 NEEQKQLRHTISKFLQENLAPKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDLTA 216
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD_RAT (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ivd PE=1 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 3.704e-53 Identity = 100/173 (57.80%), Postives = 127/173 (73.41%), Query Frame = 2 Query: 155 DDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 ++ Q Q + ++ +F +EN+AP+A +IDQSN F WK +G+ + GITAP + H + MEEISRAS +VGLSYGAHSNLCINQ+VR+G+ AQK+KYLPKLISGE +GALAMSEPNAGSDVV M+ KA++ Y++NGNK W TNGP A LVVYAKTD+ A Sbjct: 44 NEEQKQLRHTISKFVQENLAPKAQEIDQSNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASAAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMRLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDLTA 216
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: IVD_BOVIN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.837e-53 Identity = 100/173 (57.80%), Postives = 128/173 (73.99%), Query Frame = 2 Query: 155 DDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA 673 ++ Q Q +++V +F +E++AP+A +IDQSN F WK +GN + GITAP + + + MEEISR SG+VGLSYGAHSNLCINQ+VR+G+ QK+KYLPKLISGE++GALAMSEPNAGSDVV MK KA++ Y++NGNK W TNGP A LVVYAKTD+ A Sbjct: 46 NEEQKQLRQTVAKFLQEHLAPQAQEIDQSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGFLENVLVMEEISRVSGAVGLSYGAHSNLCINQIVRNGNETQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDVTA 218
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACDS_CLOAB (Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium acetobutylicum GN=bcd PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.583e-26 Identity = 62/163 (38.04%), Postives = 96/163 (58.90%), Query Frame = 2 Query: 176 KESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 664 ++ V +FA + P AA+ID++ FP + N+ K MG + + GI +E + IA+EE+S+ G+ G+ AH++LC + + HG+ QK KYL L GE +GA ++EPNAG+D + A Y+ING+K++ TNG VA T V++A TD Sbjct: 13 RQMVREFAENEVKPIAAEIDETERFPME-NV-KKMGQYGMMGIPFSKEYGGAGGDVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEHGTEEQKQKYLVPLAKGEKIGAYGLTEPNAGTDSGAQQTVAVLEGDHYVINGSKIFITNGGVADTFVIFAMTD 173
BLAST of CX296349 vs. ExPASy Swiss-Prot
Match: ACDC_BACSU (Probable acyl-CoA dehydrogenase yngJ OS=Bacillus subtilis GN=yngJ PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.123e-25 Identity = 65/166 (39.16%), Postives = 90/166 (54.22%), Query Frame = 2 Query: 164 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 661 Q +E V FA++ IAP A +DQ+ FP +K MG L GI P+E + +A+EE+ +A GS GLSY A +L + L G+ QK +L L SG +G+ ++EPNAGSD G + KA Y+ING K W TN A+T++V A T Sbjct: 9 QQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQT--FKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVT 172 The following BLAST results are available for this feature:
BLAST of CX296349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296349 ID=CX296349; Name=CX296349; organism=Citrus clementina; type=EST; length=674bpback to top |