CX296779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_ARATH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 7.549e-81 Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 2 Query: 113 RTTQSTSL---PRISVSAAATSSIEVXXXXXXXXXXXXXXLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R +S SL P SVSAA+++ V LPFR+GHGFDLHRLEPGYPLIIGGI +PH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMDEAGYEIGNLDATLILQRPK+SP+KETIR+NLS+LLGADP+VVNL A THEKVDSLGENRSIAAHTVILL Sbjct: 36 RPKKSLSLSCRPSASVSAASSA---VDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDEAGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVILL 228
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_CATRO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharanthus roseus GN=ISPF PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.682e-80 Identity = 157/233 (67.38%), Postives = 174/233 (74.68%), Query Frame = 2 Query: 2 MAAQSYTTIPLYSKITNXXXXXXXXXXXXXXXTAK---HLRTTQSTSLPRISVSAAATSSIEVXXXXXXXXXXXXXXLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 MA Y + + SK TN T L T QS +L + +AA+ +++E L FRVGHGFDLHRLEPGYPLIIGGIN+PH+RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLMDEAGYE+GNLDATLILQRPK+SP+KE IR NL +LLGADP VVNL A THEKVDSLGENRSIAAHTV+LL Sbjct: 3 MATSFYCSTAIPSKKTNQNRENFLCSPVGGSKTTPSYIRLSTRQSRTLSLVVSAAASGAAVEAEPKFAAVTPSKI--LSFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDTDPKWKGAPSSVFIKEAVRLMDEAGYELGNLDATLILQRPKVSPHKEAIRQNLCQLLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLL 233
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPDF_ERYLH (Bifunctional enzyme ispD/ispF OS=Erythrobacter litoralis (strain HTCC2594) GN=ispDF PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.440e-39 Identity = 74/150 (49.33%), Postives = 103/150 (68.67%), Query Frame = 2 Query: 224 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAA 673 LP RVG GFD+H+LE G L +GGI + H++G HSD DV LH +VDA+LGA+G DIG FP SDP+WKGA SS FI+ A +L+DEAGY +GN+D T+I + P++ P+++ + ++ELL P +++ A T EK+ G IAA Sbjct: 224 LPVRVGTGFDVHKLEAGEELWLGGIRLEHDKGLAGHSDADVALHAIVDALLGAIGKGDIGDHFPPSDPQWKGAASSAFIEHAAKLVDEAGYRVGNIDLTIICEAPRIGPHRDAMGQRIAELLATSPDAISVKATTTEKLGFTGRGEGIAA 373
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_LYSSC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Lysinibacillus sphaericus (strain C3-41) GN=ispF PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.148e-39 Identity = 76/154 (49.35%), Postives = 107/154 (69.48%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H E G PLIIGGI +PHE+G HSD DVLLH V DA LGA+G DIG+ FPD+DP +K A S+ ++ +++++ GY +GN+D T++ QRPK++PY E ++ ++ELL A+P+ VN+ A T E++ G IAA ILL Sbjct: 2 FRIGQGFDVHAFEEGRPLIIGGITIPHEKGLVGHSDADVLLHTVTDAALGAIGEGDIGRHFPDTDPAFKDADSAKLLEYIWKIVEDKGYILGNVDCTIMAQRPKMAPYIEQMQNRIAELLHAEPSQVNVKATTTERLGFTGREEGIAAMATILL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_RALME (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ispF PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.219e-38 Identity = 77/153 (50.33%), Postives = 105/153 (68.63%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+G G+D+H L PG LI+GG+++PH+RG HSD D LLH V DA+ GA L DIG+ FPD+DP + GA S V ++EAVR + EAGYEIGN+DAT+I Q+PKL+P+ + NL+E LG T N+ A T+EK+ G+ I A +L+ Sbjct: 7 RIGQGYDVHALVPGRKLILGGVDIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHFPDTDPNFAGADSRVLLREAVRRVREAGYEIGNVDATVIAQKPKLAPHISGMVANLAEDLGLPVTRCNVKAKTNEKLGFEGKEEGIVAQAAVLI 159
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_GEOSL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter sulfurreducens GN=ispF PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.592e-38 Identity = 74/153 (48.37%), Postives = 106/153 (69.28%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+GHG+D+HRL G LI+GG+++PHE G HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L G+ +GNLDAT++ QRPK++P+ +R +++ L ADP VN+ A T E++ G IAA+ V+L+ Sbjct: 2 RIGHGYDVHRLVAGRKLIVGGVDIPHELGLLGHSDADVLLHAISDAILGALALGDIGKHFPDTDPRYKGADSRALLRHVMELATRKGFHLGNLDATIVAQRPKMAPHIPLMREHIAADLMADPDRVNVKATTTEELGFAGRGEGIAAYAVVLM 154
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.547e-38 Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 233 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 R+GHG+D+H + G +++GG+ +PH + AHSDGDVL+H + DA+LGA L DIG+ FPD+DP +KGA S V ++ V L+ E GY +GN+DAT+I Q PK++P+ E +R NL++ LG VN+ A T E++ G IAAH V L+ Sbjct: 5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLGVALECVNVKATTTERLGFAGREEGIAAHAVALI 157
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACWK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus weihenstephanensis (strain KBAB4) GN=ispF PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38 Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+ A T EK+ G IA+ V+LL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACHK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus thuringiensis subsp. konkukian GN=ispF PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38 Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+ A T EK+ G IA+ V+LL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155
BLAST of CX296779 vs. ExPASy Swiss-Prot
Match: ISPF_BACCZ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ZK / E33L) GN=ispF PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38 Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 2 Query: 230 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLTAHTHEKVDSLGENRSIAAHTVILL 691 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL +N+ A T EK+ G IA+ V+LL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELLETSIDNINVKATTTEKLGFTGREEGIASQAVVLL 155 The following BLAST results are available for this feature:
BLAST of CX296779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296779 ID=CX296779; Name=CX296779; organism=Citrus clementina; type=EST; length=691bpback to top |