CX296780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS272_ARATH (40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 1.572e-37 Identity = 72/86 (83.72%), Postives = 76/86 (88.37%), Query Frame = 3 Query: 48 MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 305 MVLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ++LCQPTGG+A+LTEGCSFRRKGD Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_HORVU (40S ribosomal protein S27 OS=Hordeum vulgare GN=RPS27 PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.270e-36 Identity = 72/86 (83.72%), Postives = 74/86 (86.05%), Query Frame = 3 Query: 48 MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 305 MVLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC CQ+VLCQPTGG+ARLTEGCSFRRKGD Sbjct: 1 MVLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKGD 86
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS271_ARATH (40S ribosomal protein S27-1 OS=Arabidopsis thaliana GN=RPS27A PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.627e-34 Identity = 67/84 (79.76%), Postives = 73/84 (86.90%), Query Frame = 3 Query: 48 MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 MVLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQ++LC PTGG+A+LTEGCSFR+K Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS273_ARATH (40S ribosomal protein S27-3 OS=Arabidopsis thaliana GN=RPS27D PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.125e-34 Identity = 68/84 (80.95%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 48 MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 MVLQNDIDLL+PP RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ+VLCQPTGG+ARL EGCSFR+K Sbjct: 1 MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_CHLRE (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii GN=RPS27 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.598e-32 Identity = 66/86 (76.74%), Postives = 69/86 (80.23%), Query Frame = 3 Query: 48 MVLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 305 MVL +DIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C SVLC PTG RLTEGCSFRRK D Sbjct: 1 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRKSD 86
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_SCHPO (40S ribosomal protein S27 OS=Schizosaccharomyces pombe GN=rps27 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.605e-27 Identity = 55/78 (70.51%), Postives = 61/78 (78.21%), Query Frame = 3 Query: 66 IDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 +DLLNP +LVQ P SFFMDVKC GCFNITTVFSH+QTVV+CG+C SVLCQPTGG+ARL EGCSFRRK Sbjct: 5 VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_XENLA (40S ribosomal protein S27 OS=Xenopus laevis GN=rps27 PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_RAT (40S ribosomal protein S27 OS=Rattus norvegicus GN=Rps27 PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_MOUSE (40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CX296780 vs. ExPASy Swiss-Prot
Match: RS27_HUMAN (40S ribosomal protein S27 OS=Homo sapiens GN=RPS27 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.803e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 69 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 299 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82 The following BLAST results are available for this feature:
BLAST of CX296780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296780 ID=CX296780; Name=CX296780; organism=Citrus clementina; type=EST; length=506bpback to top |