CX297679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.823e-39 Identity = 75/107 (70.09%), Postives = 85/107 (79.44%), Query Frame = 3 Query: 6 YFLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 YF ++PS+LQ TK+MAVVDTLSTHSPDEEY+GERQQP IW+GD EI +AF+ FS N DPSRRNRCGAGVLPYEL+ PSSEPGVTC+GVPNSVSI Sbjct: 820 YFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.929e-38 Identity = 73/107 (68.22%), Postives = 85/107 (79.44%), Query Frame = 3 Query: 6 YFLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 Y+ ++PS+ Q +K+MAVVDTLSTHSPDEEY+GERQQP IW+GD EI EAF+ F+ N+DP RRNRCGAGVLPYELLVPSSEPGVTC+GVPNSVSI Sbjct: 813 YYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.711e-28 Identity = 62/107 (57.94%), Postives = 73/107 (68.22%), Query Frame = 3 Query: 6 YFLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +FL ALPS+ Q T +M V+DTLSTHS DEEYLGER W+ D A EF+ N+DPSRRNRCGAGVLPYEL+ PSS PG+TC+GVPNSV+I Sbjct: 794 FFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDE-AWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 64/109 (58.72%), Postives = 76/109 (69.72%), Query Frame = 3 Query: 6 YFLQALPSVLQATKYMAVVDTLSTHSPDEEYLGE-RQQPWI-WSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +FL A+P VL+ATK+MAVVDTLSTHSPDEEYLGE R + + W+ D A F+ N+D R+NRCGAGVLPYELL PSS PGVTC+GVPNS+SI Sbjct: 810 FFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24 Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 12 LQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 LQ+LPS +QA K MA +D LS+HSPDEEY+GE +P W + + AF +FSG N++P +NRCGAG++PYELL P SEPGVT +G+PNS+SI Sbjct: 793 LQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEP-AWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 54/107 (50.47%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGE-RQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 FL +LP+ LQATK MAV +TLSTHSPDEEYL E R+ W D ++ + F +FS N D +NR GAG+ PYELL+P+S GVT +G+PNS+SI Sbjct: 811 FLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19 Identity = 49/105 (46.67%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 15 QALPSVLQATKYMAVVDTLSTHSPDEEYLG-ERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 + PS +QAT MAV+D LSTHS DEEYLG E+ +PW + D + A+ F+ N D +NRCGAG+LPY+L+ P S+ GVT G+PNS SI Sbjct: 839 ECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPW--NSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 15 QALPSVLQATKYMAVVDTLSTHSPDEEYLG-ERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 + PS +QAT MAV+D LS+HS DEEYLG E+ +PW + D + A+ F+ N D +NRCGAG+LPY+L+ P S+ GVT G+PNS SI Sbjct: 822 ECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPW--NSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17 Identity = 50/105 (47.62%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 12 LQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 L+ PS QAT M +D LSTHSPDEEY+GE+Q+ W+ + I AF F G N + + +NR GAGV+ YELL P+SE GVT GVP S+SI Sbjct: 793 LKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEA-SWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 49/111 (44.14%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCK-----GVPNSVSI 326 +L LPS LQ MA +D LS+H+ DEEY+G Q+P W DGE+ +AF F N D SRRNR GAGV+PY LL P + + K G+PNS+SI Sbjct: 823 WLDTLPSQLQTVMVMATLDLLSSHASDEEYMGTHQEP-AWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932 The following BLAST results are available for this feature:
BLAST of CX297679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297679 ID=CX297679; Name=CX297679; organism=Citrus clementina; type=EST; length=719bpback to top |