CX297732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.048e-40 Identity = 77/112 (68.75%), Postives = 98/112 (87.50%), Query Frame = 1 Query: 91 MVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDKVS 426 MVN+AAASFR+K+N+LL+MAHD+TVG DFRLFF+VV LWLLSAIGSY S TL YIGT+LS+T+PALYS+++++VD+ CG IH+ +S HYK+VDENVISR+ +LSKDK S Sbjct: 115 MVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKDS 226
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15 Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 109 ASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDE----NVISRIPR-TLSKDK 420 + R++IN L + +I GKD + F V+A LW+LS IGS ++F TL Y T+L T+P LY ++E +VD Y + I + Y V+DE VIS+IPR L+K K Sbjct: 148 SGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15 Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 106 AASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 420 A+ R++IN + +I G+D + F +A LW+LS +G +SF TLAYI +L TVP Y ++E +VD Y + + Y V+D V S+IPR KDK Sbjct: 164 ASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDK 268
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.633e-15 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 106 AASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 420 A SF V+ N +L D+ G+D LFF L+++S IG+YF+F L +IG + T+P +Y +E VD G + + + + YK VD NV+S+IPR K+K Sbjct: 118 ARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNK 222
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14 Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 106 AASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 420 A+S R ++N ++ I +G+D + F VV LW++S +G++F+F TL YI ++ TVP LY + E +VD K + + Y V DE V+S+IP K K Sbjct: 147 ASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAK 251
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 109 ASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDKV 423 ++ R ++N ++ I +G+D + F VV LW++S +G++F+F TL YI ++ TVP LY + E +VD K + +HY V DE V+S++P K K+ Sbjct: 148 SALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAKL 252
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 33/97 (34.02%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 106 AASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRI 396 A + RV IN +L +A +I VG++ + F+V LW +S +G++ +F T+ Y+G +LS+ +P LY R++ +D + H+ I Y+ +DE ++ +I Sbjct: 93 ADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13 Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 91 MVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSK 414 +V A+ R++IN + DI G+D + F V+A LW+LS +GS +F TL YI T+L T+P LY ++E +VD + + I + Y D V+S++ + K Sbjct: 138 VVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 245
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.753e-13 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 1 Query: 106 AASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 420 A+ R++IN +I G+D + F +A LW+LS +G F+F TLAYI +L TVP Y ++E +VD + + Y V+DE V+S+IP K+K Sbjct: 168 ASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNK 272
BLAST of CX297732 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 124 KINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 420 KIN+ ++ +DI+ GKDFRL F V LW+LS +G+YFS TL YI + T+P LY ++E + + + + + VI++IP+ +K + Sbjct: 114 KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINKIPKAQAKTR 212 The following BLAST results are available for this feature:
BLAST of CX297732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297732 ID=CX297732; Name=CX297732; organism=Citrus clementina; type=EST; length=772bpback to top |